Orthogroup:group_2485


Homologs in group_2485

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01285 FBDBKF_01285 Morganella morganii S1 - RHS repeat protein
EHELCC_00260 EHELCC_00260 Morganella morganii S2 - RHS repeat protein
NLDBIP_03200 NLDBIP_03200 Morganella morganii S4 - RHS repeat protein
LHKJJB_04715 LHKJJB_04715 Morganella morganii S3 - RHS repeat protein
HKOGLL_02330 HKOGLL_02330 Morganella morganii S5 - RHS repeat protein
PMI_RS03745 PMI_RS03745 Proteus mirabilis HI4320 - RHS repeat protein

Distribution of group_2485 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2485 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2485

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2485.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 RHS repeat protein 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3209 6 R General function prediction only (R) Uncharacterized conserved protein RhaS, contains 28 RHS repeats

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05593 6 RHS Repeat

Annotations of the 13 SwissProt hits

Annotation Number of occurrences
Double-stranded DNA deaminase toxin A 1
Probable deoxyribonuclease RhsA 1
Probable deoxyribonuclease RhsB 1
Protein RhsA 1
Protein RhsB 1
Protein RhsC 1
Protein RhsD 1
Putative deoxyribonuclease RhsC 1
Putative protein RhsE 1
Toxin protein Tse5 1
tRNA nuclease WapA 1
tRNA(Glu)-specific nuclease WapA 1
tRNA3(Ser)-specific nuclease WapA 1

Protein length

Min length 192
Max length 849
Mean length (sd) 301.5 (268.2)
Median length 192.0

Protein length distribution