Orthogroup:group_2408



Homologs in group_2408

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19290 FBDBKF_19290 Morganella morganii S1 hybE hydrogenase-2 assembly chaperone
EHELCC_07575 EHELCC_07575 Morganella morganii S2 hybE hydrogenase-2 assembly chaperone
NLDBIP_07900 NLDBIP_07900 Morganella morganii S4 hybE hydrogenase-2 assembly chaperone
LHKJJB_07435 LHKJJB_07435 Morganella morganii S3 hybE hydrogenase-2 assembly chaperone
HKOGLL_03495 HKOGLL_03495 Morganella morganii S5 hybE hydrogenase-2 assembly chaperone
F4V73_RS12050 F4V73_RS12050 Morganella psychrotolerans hybE hydrogenase-2 assembly chaperone
PMI_RS00175 PMI_RS00175 Proteus mirabilis HI4320 hybE hydrogenase-2 assembly chaperone

Distribution of group_2408 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2408 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2408

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2408.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hybE 7

Product

# Product Occurence
1 hydrogenase-2 assembly chaperone 7

Pfam domain Annotation(s)

Domain ID Occurences Description
PF11939 7 [NiFe]-hydrogenase assembly, chaperone, HybE

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Hydrogenase expression/formation protein HoxT 1
Hydrogenase expression/formation protein HupJ 2
Hydrogenase expression/formation protein HupT 1
Hydrogenase-2 operon protein HybE 3
Probable rubredoxin HupJ 1

Protein length

Min length 163
Max length 164
Mean length (sd) 163.1 (0.4)
Median length 163.0

Protein length distribution