Orthogroup:group_2397


Homologs in group_2397

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19235 FBDBKF_19235 Morganella morganii S1 rplW 50S ribosomal protein L23
EHELCC_18980 EHELCC_18980 Morganella morganii S2 rplW 50S ribosomal protein L23
NLDBIP_18995 NLDBIP_18995 Morganella morganii S4 rplW 50S ribosomal protein L23
LHKJJB_18850 LHKJJB_18850 Morganella morganii S3 rplW 50S ribosomal protein L23
HKOGLL_18585 HKOGLL_18585 Morganella morganii S5 rplW 50S ribosomal protein L23
F4V73_RS18930 F4V73_RS18930 Morganella psychrotolerans rplW 50S ribosomal protein L23
PMI_RS16160 PMI_RS16160 Proteus mirabilis HI4320 rplW 50S ribosomal protein L23

Distribution of group_2397 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2397 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2397

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2397.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplW 7

Product

# Product Occurence
1 50S ribosomal protein L23 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0089 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L23

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02892 7 large subunit ribosomal protein L23 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00276 7 Ribosomal protein L23

Annotations of the 527 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL23 518
Large ribosomal subunit protein uL23c 9

Protein length

Unique protein length 100

Protein length distribution