Orthogroup:group_236


Homologs in group_236

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01580 FBDBKF_01580 Morganella morganii S1 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
EHELCC_02050 EHELCC_02050 Morganella morganii S2 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
NLDBIP_01410 NLDBIP_01410 Morganella morganii S4 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
LHKJJB_00625 LHKJJB_00625 Morganella morganii S3 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
HKOGLL_00665 HKOGLL_00665 Morganella morganii S5 - Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats
F4V73_RS01645 F4V73_RS01645 Morganella psychrotolerans - autotransporter domain-containing protein
F4V73_RS18550 F4V73_RS18550 Morganella psychrotolerans - autotransporter domain-containing protein
PMI_RS19665 PMI_RS19665 Proteus mirabilis HI4320 - autotransporter domain-containing protein

Distribution of group_236 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_236 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_236

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_236.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 8

Product

# Product Occurence
1 Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats 5
2 autotransporter domain-containing protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5563 8 S Function unknown (S) Uncharacterized conserved protein CPn0794, contains PKD-like HAF repeats

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03797 8 Autotransporter beta-domain

Annotations of the 13 SwissProt hits

Annotation Number of occurrences
ATP synthase subunit b 3
Accumulation-associated protein 1
Actin cytoskeleton-regulatory complex protein PAN1 1
Apical junction molecule 1
Dynein heavy chain-like protein 2 1
Levansucrase 1
Neurofilament medium polypeptide 1
Prostate collagen triple helix protein 1
Protein PF3D7_1417600 1
Reticulocyte-binding protein homolog 2a 1
Translation initiation factor IF-2 1

Protein length

Min length 710
Max length 954
Mean length (sd) 747.0 (84.9)
Median length 710.0

Protein length distribution