Orthogroup:group_2309



Homologs in group_2309

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17730 FBDBKF_17730 Morganella morganii S1 cirA Outer membrane receptor protein, Fe transport
EHELCC_09755 EHELCC_09755 Morganella morganii S2 cirA Outer membrane receptor protein, Fe transport
NLDBIP_10135 NLDBIP_10135 Morganella morganii S4 cirA Outer membrane receptor protein, Fe transport
LHKJJB_07620 LHKJJB_07620 Morganella morganii S3 cirA Outer membrane receptor protein, Fe transport
HKOGLL_07170 HKOGLL_07170 Morganella morganii S5 cirA Outer membrane receptor protein, Fe transport
F4V73_RS15230 F4V73_RS15230 Morganella psychrotolerans - secretin and TonB N-terminal domain-containing protein
PMI_RS18440 PMI_RS18440 Proteus mirabilis HI4320 - TonB-dependent receptor

Distribution of group_2309 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2309 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2309

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2309.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cirA 5
2 - 2

Product

# Product Occurence
1 Outer membrane receptor protein, Fe transport 5
2 secretin and TonB N-terminal domain-containing protein 1
3 TonB-dependent receptor 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4771 7 P Inorganic ion transport and metabolism (P) Outer membrane receptor for ferrienterochelin and colicins

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07660 7 Secretin and TonB N terminus short domain
PF07715 7 TonB-dependent Receptor Plug Domain

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Ferric-pyoverdine 358 receptor 1
Ferric-pyoverdine M114 receptor PbuA 1
Ferripyoverdine receptor 1
Uncharacterized protein HI_1369 1
Uncharacterized protein YddB 1

Protein length

Min length 916
Max length 928
Mean length (sd) 925.1 (5.0)
Median length 928.0

Protein length distribution