Homologs in group_2274

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17485 FBDBKF_17485 93.8 Morganella morganii S1 hypE hydrogenase expression/formation protein HypE
EHELCC_17380 EHELCC_17380 93.8 Morganella morganii S2 hypE hydrogenase expression/formation protein HypE
NLDBIP_17815 NLDBIP_17815 93.8 Morganella morganii S4 hypE hydrogenase expression/formation protein HypE
LHKJJB_17735 LHKJJB_17735 93.8 Morganella morganii S3 hypE hydrogenase expression/formation protein HypE
HKOGLL_17745 HKOGLL_17745 93.8 Morganella morganii S5 hypE hydrogenase expression/formation protein HypE
PMI_RS00195 PMI_RS00195 78.5 Proteus mirabilis HI4320 hypE hydrogenase expression/formation protein HypE

Distribution of the homologs in the orthogroup group_2274

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2274

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24193 1.81e-166 470 67 0 336 1 hypE Carbamoyl dehydratase HypE Escherichia coli (strain K12)
P40599 5.05e-105 314 47 3 338 3 hypE Carbamoyl dehydratase HypE Rhizobium leguminosarum bv. viciae
P26412 2.99e-103 309 49 3 337 3 hypE Carbamoyl dehydratase HypE Rhodobacter capsulatus
P31906 1.81e-101 305 46 4 337 3 hypE Carbamoyl dehydratase HypE Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P40595 1.66e-97 295 44 3 336 3 hypE Carbamoyl dehydratase HypE Azotobacter vinelandii
P42034 1.3e-93 285 43 3 336 3 hupE Hydrogenase expression/formation protein HupE Azotobacter chroococcum mcd 1
P31905 1.19e-87 270 46 3 323 1 hypE Carbamoyl dehydratase HypE Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q58089 9.97e-71 226 38 6 342 3 MJ0676 Putative hydrogenase expression/formation protein MJ0676 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9V1N8 3.43e-06 51 22 3 241 3 thiL Thiamine-monophosphate kinase Pyrococcus abyssi (strain GE5 / Orsay)
Q9HNP1 7.36e-06 50 27 7 216 3 thiL Thiamine-monophosphate kinase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
O27447 1.02e-05 50 27 8 241 3 thiL Thiamine-monophosphate kinase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
P57532 2.89e-05 48 24 8 214 3 thiL Thiamine-monophosphate kinase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
O59497 3.61e-05 48 24 7 245 3 thiL Thiamine-monophosphate kinase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q8XE87 0.000449 45 27 9 266 3 thiL Thiamine-monophosphate kinase Escherichia coli O157:H7
P55881 0.000523 45 27 7 213 1 thiL Thiamine-monophosphate kinase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AGG0 0.00062 44 27 7 213 1 thiL Thiamine-monophosphate kinase Escherichia coli (strain K12)
P0AGG1 0.00062 44 27 7 213 3 thiL Thiamine-monophosphate kinase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16660
Feature type CDS
Gene hypE
Product hydrogenase expression/formation protein HypE
Location 154966 - 155985 (strand: -1)
Length 1020 (nucleotides) / 339 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2274
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00586 AIR synthase related protein, N-terminal domain
PF02769 AIR synthase related protein, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0309 Posttranslational modification, protein turnover, chaperones (O) O Carbamoyl dehydratase HypE (hydrogenase maturation factor)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04655 hydrogenase expression/formation protein HypE - -

Protein Sequence

MKPITEITLAQGNGGQGMQQLIDSLFLQAFSNPYLNEKEDQARIPLAELQAAGDRLAFSTDSYVIDPIIFPGGNIGKLAVCGTANDLSVGGAVPRYLSCGFILEEGLSFEILSQLVTSMAETAKANGIQIVTGDTKVVQRGAADKIFINTAGIGVIPSQLNWAAAQCRPGDKIIVSGTLGDHGAAILNLRENLGLDADLQSDCAVLEPMLAPLRAISGVRAVRDATRGGVTAILHEFSDASQYGMNIEEQALPVKTAVRGVCELLGLEALNFANEGKVVIVVAPEAENAVLAALHASPLGQDACTIGQVTEVKKVKVQGIFGATRLLDLPYNEPLPRIC

Flanking regions ( +/- flanking 50bp)

TTCAGAAGGGGCATGCGCGGCTTATTATCAATATCGTCGCGGAGAATAAAATGAAACCCATTACTGAAATTACGTTAGCGCAGGGCAATGGCGGACAGGGAATGCAGCAGCTGATTGACTCGCTGTTTTTACAGGCCTTTTCTAACCCGTACCTGAATGAGAAAGAAGATCAGGCGCGGATCCCGCTGGCAGAATTACAGGCGGCAGGCGATCGTCTGGCGTTCAGTACTGACAGCTATGTGATTGATCCGATTATTTTTCCCGGTGGTAATATCGGCAAACTGGCCGTATGCGGCACGGCAAACGATCTTTCTGTCGGCGGTGCTGTTCCGCGTTATCTCTCCTGCGGATTTATTCTCGAAGAAGGGCTCTCTTTTGAGATACTGTCACAACTGGTCACCAGCATGGCAGAAACCGCAAAAGCGAACGGAATTCAGATAGTTACCGGTGATACTAAAGTGGTGCAACGGGGTGCTGCGGATAAAATCTTTATCAATACCGCCGGTATTGGCGTGATCCCGTCACAACTGAACTGGGCAGCAGCACAGTGTCGTCCGGGCGATAAAATTATTGTCAGCGGCACACTGGGCGATCATGGTGCCGCGATCCTTAATCTGCGTGAAAACCTCGGACTGGATGCGGATCTACAAAGTGACTGCGCAGTACTCGAACCCATGCTGGCACCTCTGCGTGCAATCAGCGGCGTCAGAGCCGTGCGGGATGCCACCCGTGGCGGCGTCACTGCGATCCTGCATGAATTTTCCGATGCCTCTCAGTACGGTATGAATATCGAAGAGCAGGCATTGCCGGTAAAAACCGCCGTGCGCGGTGTTTGCGAACTGCTGGGGCTTGAAGCACTCAATTTTGCCAACGAAGGTAAAGTCGTGATTGTGGTGGCTCCCGAAGCAGAAAATGCCGTGCTGGCAGCATTGCACGCAAGCCCGCTGGGGCAGGATGCCTGTACCATCGGGCAGGTAACAGAAGTGAAAAAAGTGAAAGTACAGGGGATATTCGGGGCAACCAGACTCCTGGATTTGCCGTATAATGAGCCCTTACCCCGCATCTGCTAATCTGCGTCATCCTTCGCTCCACAGCTGCGTTGGCTGCATAAAAATCCCCG