Orthogroup:group_2218


Homologs in group_2218

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16950 FBDBKF_16950 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_16640 EHELCC_16640 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_16850 NLDBIP_16850 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_16620 LHKJJB_16620 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_17585 HKOGLL_17585 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS18420 F4V73_RS18420 Morganella psychrotolerans - DedA family protein
PMI_RS17565 PMI_RS17565 Proteus mirabilis HI4320 - DedA family protein

Distribution of group_2218 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2218 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2218

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2218.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dedA 5
2 - 2

Product

# Product Occurence
1 Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family 5
2 DedA family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0586 7 M Cell wall/membrane/envelope biogenesis (M) Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03975 7 membrane-associated protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF09335 7 VTT domain

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
Alkaline phosphatase-like protein 2
DedA family protein 1
Inner membrane protein BB_0250 1
Inner membrane protein YabI 1
Inner membrane protein YghB 5
Inner membrane protein YohD 1
Inner membrane protein YqjA 4
Protein DedA 2
Uncharacterized membrane protein BU139 1
Uncharacterized membrane protein BUsg_132 1
Uncharacterized membrane protein ML0287 1
Uncharacterized membrane protein ML0467 1
Uncharacterized membrane protein MT0380 1
Uncharacterized membrane protein MT2715 1
Uncharacterized membrane protein Mb2670 1
Uncharacterized membrane protein Rv0364 1
Uncharacterized membrane protein Rv2637 1
Uncharacterized membrane protein bbp_130 1
Uncharacterized membrane protein slr0232 1
Uncharacterized protein MJ0201 1
Undecaprenyl phosphate transporter A 1

Protein length

Min length 156
Max length 177
Mean length (sd) 161.9 (10.0)
Median length 156.0

Protein length distribution