Homologs in group_2182

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16435 FBDBKF_16435 100.0 Morganella morganii S1 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
EHELCC_08300 EHELCC_08300 100.0 Morganella morganii S2 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
NLDBIP_08625 NLDBIP_08625 100.0 Morganella morganii S4 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
LHKJJB_05640 LHKJJB_05640 100.0 Morganella morganii S3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
F4V73_RS02955 F4V73_RS02955 83.4 Morganella psychrotolerans thiD bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
PMI_RS07770 PMI_RS07770 71.7 Proteus mirabilis HI4320 thiD bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase

Distribution of the homologs in the orthogroup group_2182

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2182

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76422 5.82e-127 364 67 0 264 1 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Escherichia coli (strain K12)
P55882 2.19e-124 357 66 0 264 1 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P56904 2.32e-84 256 54 1 261 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Rhizobium meliloti (strain 1021)
Q6GEY2 9.3e-63 201 41 4 259 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Staphylococcus aureus (strain MRSA252)
Q8NVH3 1.3e-62 201 41 4 259 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Staphylococcus aureus (strain MW2)
Q6G7L7 1.3e-62 201 41 4 259 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Staphylococcus aureus (strain MSSA476)
P44697 2.74e-62 199 47 5 261 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P99124 4.15e-62 199 40 4 259 1 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Staphylococcus aureus (strain N315)
P66915 4.15e-62 199 40 4 259 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Staphylococcus aureus (strain Mu50 / ATCC 700699)
P61422 3.39e-61 203 47 2 260 3 thiDE Thiamine biosynthesis bifunctional protein ThiED Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Q8FTH8 2.38e-58 201 45 2 257 3 thiED Thiamine biosynthesis multifunctional protein ThiED Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Q5M731 1.56e-55 189 40 2 259 1 TH1 Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic Arabidopsis thaliana
Q8NQH1 1.69e-55 193 46 4 258 3 theD Thiamine biosynthesis multifunctional protein ThiED Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
O25515 5.01e-52 173 42 3 257 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Helicobacter pylori (strain ATCC 700392 / 26695)
O48881 1.72e-51 178 39 2 258 1 BTH1 Thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic Brassica napus
Q9ZL00 4.9e-51 171 41 4 245 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Helicobacter pylori (strain J99 / ATCC 700824)
O67772 6.15e-51 170 37 1 249 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Aquifex aeolicus (strain VF5)
O31620 1.46e-49 167 41 4 259 1 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Bacillus subtilis (strain 168)
Q2QWK9 1.31e-48 171 39 4 262 2 Os12g0192500 Probable thiamine biosynthetic bifunctional enzyme, chloroplastic Oryza sativa subsp. japonica
O94266 1.52e-46 166 37 2 256 3 SPBP8B7.18c Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9ZBL1 2.26e-41 146 38 5 251 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Mycobacterium leprae (strain TN)
P9WG77 3.43e-39 140 38 5 248 1 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG76 3.43e-39 140 38 5 248 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66914 3.43e-39 140 38 5 248 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9ZBR6 6.57e-38 137 39 4 244 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O85786 7.78e-37 134 40 4 259 3 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
O94265 1.02e-36 139 31 5 271 3 SPBP8B7.17c Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P39610 2.74e-36 132 35 6 265 1 pdxK Pyridoxine kinase Bacillus subtilis (strain 168)
Q9USL6 9.21e-33 125 32 5 235 3 SPCC18B5.05c Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase C18B5.05c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5HI96 7.34e-31 119 32 4 257 3 pdxK Putative pyridoxine kinase Staphylococcus aureus (strain COL)
Q8CTQ7 5.42e-30 116 32 5 259 3 pdxK Putative pyridoxine kinase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HRG7 1.81e-29 115 32 5 259 3 pdxK Putative pyridoxine kinase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
A0A0J9X285 8.54e-29 112 35 7 253 1 ACINIS123_0279 Hydroxylmethylpyrimidine kinase Acinetobacter baumannii (strain IS-123)
Q06490 2.32e-28 116 30 8 270 2 THI22 Thiamine biosynthesis protein THI22 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q08975 5.42e-28 115 33 8 271 1 THI21 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q08224 8.43e-28 114 34 7 270 1 THI20 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O83153 1.01e-24 102 35 4 223 3 pdxK Putative pyridoxine kinase Treponema pallidum (strain Nichols)
Q57688 1.09e-22 99 27 7 254 1 thiDN Bifunctional thiamine biosynthesis protein ThiDN Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9WZP7 1.56e-10 64 28 9 242 1 thiDN Bifunctional thiamine biosynthesis protein ThiDN Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_05275
Feature type CDS
Gene thiD
Product Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
Location 112393 - 113190 (strand: 1)
Length 798 (nucleotides) / 265 (amino acids)

Contig

Accession ZDB_682
Length 259781 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2182
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08543 Phosphomethylpyrimidine kinase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0351 Coenzyme transport and metabolism (H) H Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase

Kegg Ortholog Annotation(s)

Protein Sequence

MRINALTIAGTDPSGGAGIQADLKTFSALGVYGTTVITALVAQNTCGVNSVHSVPPEFVAAQLDAVLTDVRIDSAKIGMLSDGGVIRTVAEKLRQYPVPYVVLDTVMLAKSGDPLLKAEAVDLLISELLPHVSVITPNLPEAAALLKTAVATDEKMMQQQGEALMAAGANAVLLKGGHLDNAESPDWLFLPDGRHRFTSTRIPTKNSHGTGCTLSAAMAALRPQCADWAETTEAAKQYLHGALAAADSLEVGHGHGPVHHFYQWW

Flanking regions ( +/- flanking 50bp)

ATGCGTATAATTCACTATACAGAGTGGTACAGCAAAACAGGAGATATCAGGTGAGAATCAACGCATTAACCATTGCAGGAACGGATCCGAGCGGCGGCGCGGGTATCCAGGCAGATTTAAAAACCTTTTCTGCACTGGGCGTTTACGGCACCACGGTAATAACAGCGCTGGTGGCACAAAATACCTGTGGCGTAAATTCTGTTCATTCTGTTCCGCCGGAATTTGTCGCAGCACAACTGGATGCGGTACTGACGGATGTCAGAATTGACAGCGCCAAGATTGGTATGTTGTCTGACGGCGGCGTGATCCGCACCGTGGCTGAGAAACTGCGTCAGTATCCTGTGCCGTACGTGGTACTGGATACAGTCATGCTGGCGAAAAGCGGCGATCCGCTGCTGAAAGCCGAAGCGGTTGATTTACTGATCTCTGAATTATTACCTCATGTTTCGGTTATTACCCCCAATCTTCCCGAAGCGGCGGCATTACTGAAAACCGCTGTCGCCACAGATGAAAAAATGATGCAGCAGCAGGGCGAGGCACTGATGGCCGCCGGGGCAAACGCCGTATTGCTGAAGGGCGGGCATCTGGATAACGCCGAAAGCCCTGACTGGCTGTTTCTGCCGGATGGCCGCCACCGCTTTACCTCAACCCGTATTCCGACCAAAAACAGCCATGGCACCGGCTGTACATTGTCTGCGGCAATGGCGGCATTGCGGCCTCAGTGTGCGGATTGGGCGGAAACCACGGAAGCGGCAAAACAGTATCTGCACGGGGCGCTGGCGGCGGCAGACAGCCTCGAAGTGGGTCACGGACATGGTCCGGTTCACCATTTTTATCAGTGGTGGTGATATCACACGATAATTGGTGTATATTGCGCGCTTTTCAGGGGGGAAGATAT