Orthogroup:group_2125


Homologs in group_2125

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15975 FBDBKF_15975 Morganella morganii S1 acrR multidrug efflux transporter transcriptional repressor AcrR
EHELCC_18580 EHELCC_18580 Morganella morganii S2 acrR multidrug efflux transporter transcriptional repressor AcrR
NLDBIP_17410 NLDBIP_17410 Morganella morganii S4 acrR multidrug efflux transporter transcriptional repressor AcrR
LHKJJB_17250 LHKJJB_17250 Morganella morganii S3 acrR multidrug efflux transporter transcriptional repressor AcrR
HKOGLL_17145 HKOGLL_17145 Morganella morganii S5 acrR multidrug efflux transporter transcriptional repressor AcrR
F4V73_RS16335 F4V73_RS16335 Morganella psychrotolerans acrR multidrug efflux transporter transcriptional repressor AcrR
PMI_RS00645 PMI_RS00645 Proteus mirabilis HI4320 acrR multidrug efflux transporter transcriptional repressor AcrR

Distribution of group_2125 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2125 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2125

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2125.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrR 7

Product

# Product Occurence
1 multidrug efflux transporter transcriptional repressor AcrR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 7 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03577 7 TetR/AcrR family transcriptional regulator, acrAB operon repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 7 Bacterial regulatory proteins, tetR family
PF08361 7 MAATS-type transcriptional repressor, C-terminal region

Annotations of the 86 SwissProt hits

Annotation Number of occurrences
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR 10
Fatty acid metabolism regulator protein 1
HTH-type nicotine-responsive transcriptional repressor HdnoR 1
HTH-type transcriptional regulator AcrR 3
HTH-type transcriptional regulator BetI 30
HTH-type transcriptional regulator CymR 1
HTH-type transcriptional regulator LmrA 1
HTH-type transcriptional regulator MW2498 1
HTH-type transcriptional regulator MtrR 1
HTH-type transcriptional regulator QacR 3
HTH-type transcriptional regulator SA2364 1
HTH-type transcriptional regulator SAB2452 1
HTH-type transcriptional regulator SACOL2593 1
HTH-type transcriptional regulator SAOUHSC_02897 1
HTH-type transcriptional regulator SAR2658 1
HTH-type transcriptional regulator SAS2464 1
HTH-type transcriptional regulator SAUSA300_2515 1
HTH-type transcriptional regulator SAV2578 1
HTH-type transcriptional regulator SrpR 1
HTH-type transcriptional regulator TtgR 1
HTH-type transcriptional repressor AcnR 1
HTH-type transcriptional repressor BepR 1
HTH-type transcriptional repressor KstR2 4
HTH-type transcriptional repressor Rv1474c 1
Nucleoid occlusion factor SlmA 1
Probable HTH-type transcriptional regulator ArpR 1
Probable HTH-type transcriptional regulator MepR 1
Probable HTH-type transcriptional regulator TtgR 1
Probable acrEF/envCD operon repressor 2
Tetracycline repressor protein class H 1
Transcriptional repressor Mce3R 1
Transposon Tn10 TetC protein 1
Uncharacterized HTH-type transcriptional regulator TtgW 1
Uncharacterized HTH-type transcriptional regulator YdgC 1
Uncharacterized HTH-type transcriptional regulator YerO 1
Uncharacterized HTH-type transcriptional regulator YfiR 1
Uncharacterized HTH-type transcriptional regulator YhgD 1
Uncharacterized HTH-type transcriptional regulator YuxN 1
Uncharacterized HTH-type transcriptional regulator YxaF 1
Uncharacterized HTH-type transcriptional regulator pXO2-48/BXB0055/GBAA_pXO2_0055 1

Protein length

Min length 214
Max length 215
Mean length (sd) 214.9 (0.4)
Median length 215.0

Protein length distribution