COG0706


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0706, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Membrane protein insertase Oxa1/YidC/SpoIIIJ
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0706 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2086 FBDBKF_15600 49959 51581 1 yidC membrane protein insertase YidC Morganella morganii S1
1 group_2086 EHELCC_15960 49259 50881 1 yidC membrane protein insertase YidC Morganella morganii S2
2 group_2086 NLDBIP_16410 29782 31404 -1 yidC membrane protein insertase YidC Morganella morganii S4
3 group_2086 LHKJJB_16395 49259 50881 1 yidC membrane protein insertase YidC Morganella morganii S3
4 group_2086 HKOGLL_16165 49259 50881 1 yidC membrane protein insertase YidC Morganella morganii S5
5 group_2086 F4V73_RS17555 146425 148047 -1 yidC membrane protein insertase YidC Morganella psychrotolerans
6 group_2086 PMI_RS15485 3442710 3444350 -1 yidC membrane protein insertase YidC Proteus mirabilis HI4320