Orthogroup:group_2038


Homologs in group_2038

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15290 FBDBKF_15290 Morganella morganii S1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains
EHELCC_10955 EHELCC_10955 Morganella morganii S2 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains
NLDBIP_11300 NLDBIP_11300 Morganella morganii S4 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains
LHKJJB_11160 LHKJJB_11160 Morganella morganii S3 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains
HKOGLL_09770 HKOGLL_09770 Morganella morganii S5 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains
F4V73_RS12160 F4V73_RS12160 Morganella psychrotolerans - CNNM domain-containing protein
PMI_RS01845 PMI_RS01845 Proteus mirabilis HI4320 - HlyC/CorC family transporter

Distribution of group_2038 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2038 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2038

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2038.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 corB 5
2 - 2

Product

# Product Occurence
1 Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains 5
2 CNNM domain-containing protein 1
3 HlyC/CorC family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4536 7 P Inorganic ion transport and metabolism (P) Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03699 7 magnesium and cobalt exporter, CNNM family - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00571 7 CBS domain
PF01595 7 Cyclin M transmembrane N-terminal domain
PF03471 7 Transporter associated domain

Annotations of the 76 SwissProt hits

Annotation Number of occurrences
DUF21 domain-containing protein At1g55930, chloroplastic 1
DUF21 domain-containing protein At2g14520 1
DUF21 domain-containing protein At4g14230 1
DUF21 domain-containing protein At4g14240 1
DUF21 domain-containing protein At4g33700 1
DUF21 domain-containing protein At5g52790 1
Hemolysin C 4
Hemolysin C homolog 3
Magnesium and cobalt efflux protein CorC 12
Metal transporter CNNM2 3
Metal transporter CNNM3 2
Metal transporter CNNM4 4
Metal transporter cnnm-4 1
Metal transporter cnnm-5 1
Polyamine export protein 5
Possible hemolysin C 4
Protein MAM3 1
Putative DUF21 domain-containing protein At1g03270 1
Putative DUF21 domain-containing protein At3g13070, chloroplastic 1
UPF0053 inner membrane protein YfjD 1
UPF0053 inner membrane protein YoaE 3
UPF0053 protein BU323 1
UPF0053 protein BUsg_314 1
UPF0053 protein HI_0107 1
UPF0053 protein MG146 1
UPF0053 protein MG146 homolog 1
UPF0053 protein MT1890 1
UPF0053 protein MT2435 1
UPF0053 protein Mb2387c 1
UPF0053 protein Rv1842c 1
UPF0053 protein Rv2366c 1
UPF0053 protein YegH 2
UPF0053 protein YhdP 1
UPF0053 protein YhdT 1
UPF0053 protein YqhB 1
UPF0053 protein YrkA 1
UPF0053 protein YugS 1
UPF0053 protein bbp_300 1
UPF0053 protein in cps region (Fragment) 1
UPF0053 protein sll0260 1
UPF0053 protein sll1254 1
Uncharacterized protein MT1889 1
Uncharacterized protein Rv1841c 1
Unextended protein 1

Protein length

Min length 424
Max length 430
Mean length (sd) 429.1 (2.3)
Median length 430.0

Protein length distribution