VFG013626


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG013626, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein radical SAM family heme chaperone HemW
VF ID VF0758
Category Nutritional/Metabolic factor
Protein ID WP_011272071
Vf_category_id VFC0272

Occurence in the database

VFG013626 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1996 FBDBKF_15025 16180 17310 -1 hemW radical SAM family heme chaperone HemW Morganella morganii S1
1 group_1996 EHELCC_11220 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S2
2 group_1996 NLDBIP_11565 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S4
3 group_1996 LHKJJB_11425 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S3
4 group_1996 HKOGLL_10035 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S5
5 group_1996 F4V73_RS12425 68289 69419 1 hemW radical SAM family heme chaperone HemW Morganella psychrotolerans
6 group_1996 PMI_RS01585 382997 384127 -1 hemW radical SAM family heme chaperone HemW Proteus mirabilis HI4320