Orthogroup:group_1873


Homologs in group_1873

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13985 FBDBKF_13985 Morganella morganii S1 relA GTP diphosphokinase
EHELCC_11660 EHELCC_11660 Morganella morganii S2 relA GTP diphosphokinase
NLDBIP_12000 NLDBIP_12000 Morganella morganii S4 relA GTP diphosphokinase
LHKJJB_11860 LHKJJB_11860 Morganella morganii S3 relA GTP diphosphokinase
HKOGLL_10475 HKOGLL_10475 Morganella morganii S5 relA GTP diphosphokinase
F4V73_RS12840 F4V73_RS12840 Morganella psychrotolerans relA GTP diphosphokinase
PMI_RS01045 PMI_RS01045 Proteus mirabilis HI4320 relA GTP diphosphokinase

Distribution of group_1873 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1873 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1873

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1873.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 relA 7

Product

# Product Occurence
1 GTP diphosphokinase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0317 7 TK Signal transduction mechanisms (T)
Transcription (K)		 (p)ppGpp synthase/hydrolase, HD superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00951 1 GTP pyrophosphokinase [EC:2.7.6.5] Purine metabolism
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02824 7 TGS domain
PF04607 7 Region found in RelA / SpoT proteins
PF13291 7 ACT domain
PF13328 7 HD domain
PF19296 7 RelA/SpoT, AH and RIS domains

Annotations of the 55 SwissProt hits

Annotation Number of occurrences
Bifunctional (p)ppGpp synthase/hydrolase RelA 3
Bifunctional (p)ppGpp synthase/hydrolase SpoT 1
GTP diphosphokinase CRSH1, chloroplastic 1
GTP diphosphokinase CRSH2, chloroplastic 1
GTP diphosphokinase CRSH3, chloroplastic 1
GTP pyrophosphokinase 19
GTP pyrophosphokinase YwaC 1
GTP pyrophosphokinase rsh 5
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 7
Probable GTP diphosphokinase CRSH, chloroplastic 1
Probable GTP diphosphokinase RSH2, chloroplastic 3
Probable GTP diphosphokinase RSH3, chloroplastic 3
Probable GTP pyrophosphokinase 2
Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 3
Putative GTP diphosphokinase RSH1, chloroplastic 3
Putative ankyrin repeat protein RF_0381 1

Protein length

Min length 744
Max length 746
Mean length (sd) 744.3 (0.8)
Median length 744.0

Protein length distribution