Orthogroup:group_1842


Homologs in group_1842

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13750 FBDBKF_13750 Morganella morganii S1 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
EHELCC_11420 EHELCC_11420 Morganella morganii S2 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
NLDBIP_11765 NLDBIP_11765 Morganella morganii S4 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
LHKJJB_11625 LHKJJB_11625 Morganella morganii S3 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
HKOGLL_10235 HKOGLL_10235 Morganella morganii S5 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
F4V73_RS12620 F4V73_RS12620 Morganella psychrotolerans - YiiX/YebB-like N1pC/P60 family cysteine hydrolase
PMI_RS07460 PMI_RS07460 Proteus mirabilis HI4320 - YiiX/YebB-like N1pC/P60 family cysteine hydrolase

Distribution of group_1842 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1842 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1842

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1842.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 5
2 YiiX/YebB-like N1pC/P60 family cysteine hydrolase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3863 1 S Function unknown (S) Uncharacterized conserved protein YycO, NlpC/P60 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05708 7 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein YiiX 1

Protein length

Min length 166
Max length 187
Mean length (sd) 184.0 (7.9)
Median length 187.0

Protein length distribution