Orthogroup:group_1838


Homologs in group_1838

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13620 FBDBKF_13620 Morganella morganii S1 perM putative PurR-regulated permease PerM
EHELCC_08475 EHELCC_08475 Morganella morganii S2 perM putative PurR-regulated permease PerM
NLDBIP_08800 NLDBIP_08800 Morganella morganii S4 perM putative PurR-regulated permease PerM
LHKJJB_05465 LHKJJB_05465 Morganella morganii S3 perM putative PurR-regulated permease PerM
HKOGLL_05450 HKOGLL_05450 Morganella morganii S5 perM putative PurR-regulated permease PerM
F4V73_RS03130 F4V73_RS03130 Morganella psychrotolerans - AI-2E family transporter
PMI_RS07635 PMI_RS07635 Proteus mirabilis HI4320 - AI-2E family transporter

Distribution of group_1838 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1838 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1838

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1838.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 perM 5
2 - 2

Product

# Product Occurence
1 putative PurR-regulated permease PerM 5
2 AI-2E family transporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0628 7 R General function prediction only (R) Predicted PurR-regulated permease PerM

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03548 7 putative permease - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01594 7 AI-2E family transporter

Annotations of the 27 SwissProt hits

Annotation Number of occurrences
AI-2 transport protein TqsA 2
Putative permease PerM 2
Putative permease PerM homolog 1
Putative transport protein BB_0006 1
Putative transport protein BpOF4_00890 1
Putative transport protein HI_0338 1
Putative transport protein MT0215 1
Putative transport protein MT1133 1
Putative transport protein RP630 1
Putative transport protein Rv0205 1
Putative transport protein Rv1101c 1
Putative transport protein TM_1187 1
Putative transport protein TM_1349 1
Putative transport protein YdbI 1
Putative transport protein YdiK 2
Putative transport protein YhhT 2
Putative transport protein YrrI 1
Putative transport protein YtvI 1
Putative transport protein YubA 1
Putative transport protein YueF 1
Putative transport protein aq_740 1
Putative transport protein sll0060 1
Putative transport protein sll0063 1

Protein length

Min length 360
Max length 362
Mean length (sd) 360.3 (0.8)
Median length 360.0

Protein length distribution