Orthogroup:group_1733


Homologs in group_1733

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12095 FBDBKF_12095 Morganella morganii S1 typA ribosome-dependent GTPase TypA
EHELCC_14210 EHELCC_14210 Morganella morganii S2 typA ribosome-dependent GTPase TypA
NLDBIP_15305 NLDBIP_15305 Morganella morganii S4 typA ribosome-dependent GTPase TypA
LHKJJB_15305 LHKJJB_15305 Morganella morganii S3 typA ribosome-dependent GTPase TypA
HKOGLL_14425 HKOGLL_14425 Morganella morganii S5 typA ribosome-dependent GTPase TypA
F4V73_RS14550 F4V73_RS14550 Morganella psychrotolerans typA translational GTPase TypA
PMI_RS14240 PMI_RS14240 Proteus mirabilis HI4320 typA ribosome-dependent GTPase TypA

Distribution of group_1733 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1733 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1733

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1733.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 typA 7

Product

# Product Occurence
1 ribosome-dependent GTPase TypA 6
2 translational GTPase TypA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1217 7 T Signal transduction mechanisms (T) Predicted membrane GTPase TypA/BipA involved in stress response

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06207 7 GTP-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00009 7 Elongation factor Tu GTP binding domain
PF00679 7 Elongation factor G C-terminus
PF03144 7 Elongation factor Tu domain 2
PF21018 7 TypA/BipA C-terminal domain

Annotations of the 619 SwissProt hits

Annotation Number of occurrences
Elongation factor 2 20
Elongation factor 4 546
Elongation factor 4 1 2
Large ribosomal subunit assembly factor BipA 14
Putative elongation factor TypA-like SVR3, chloroplastic 1
Translation factor GUF1 homolog, chloroplastic 8
Translation factor GUF1 homolog, mitochondrial 3
Translation factor GUF1 homolog, organellar chromatophore 1
Translation factor GUF1, mitochondrial 14
Translation factor guf1, mitochondrial 10

Protein length

Min length 606
Max length 611
Mean length (sd) 606.7 (1.9)
Median length 606.0

Protein length distribution