COG3529


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3529, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted nucleic-acid-binding protein, contains Zn-ribbon domain
Function(s) descr. General function prediction only (R)

Occurence in the database

COG3529 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1690 FBDBKF_11785 7678 7881 -1 yheV YheV family putative zinc ribbon protein Morganella morganii S1
1 group_1690 EHELCC_14520 126824 127027 1 yheV YheV family putative zinc ribbon protein Morganella morganii S2
2 group_1690 NLDBIP_15615 130761 130964 1 yheV YheV family putative zinc ribbon protein Morganella morganii S4
3 group_1690 LHKJJB_14995 7678 7881 -1 yheV YheV family putative zinc ribbon protein Morganella morganii S3
4 group_1690 HKOGLL_19290 5470 5673 1 yheV YheV family putative zinc ribbon protein Morganella morganii S5
5 group_1690 F4V73_RS14870 210329 210538 1 YheV family putative zinc ribbon protein Morganella psychrotolerans
6 group_1690 PMI_RS13850 3075908 3076111 -1 YheV family putative zinc ribbon protein Proteus mirabilis HI4320