Orthogroup:group_1563


Homologs in group_1563

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10135 FBDBKF_10135 Morganella morganii S1 mnmH tRNA 2-selenouridine(34) synthase MnmH
EHELCC_04935 EHELCC_04935 Morganella morganii S2 mnmH tRNA 2-selenouridine(34) synthase MnmH
NLDBIP_04935 NLDBIP_04935 Morganella morganii S4 mnmH tRNA 2-selenouridine(34) synthase MnmH
LHKJJB_13695 LHKJJB_13695 Morganella morganii S3 mnmH tRNA 2-selenouridine(34) synthase MnmH
HKOGLL_12840 HKOGLL_12840 Morganella morganii S5 mnmH tRNA 2-selenouridine(34) synthase MnmH
F4V73_RS00205 F4V73_RS00205 Morganella psychrotolerans mnmH tRNA 2-selenouridine(34) synthase MnmH
PMI_RS06095 PMI_RS06095 Proteus mirabilis HI4320 mnmH tRNA 2-selenouridine(34) synthase MnmH

Distribution of group_1563 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1563 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1563

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1563.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mnmH 7

Product

# Product Occurence
1 tRNA 2-selenouridine(34) synthase MnmH 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2603 7 J Translation, ribosomal structure and biogenesis (J) tRNA 2-selenouridine synthase SelU, contains rhodanese domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06917 7 tRNA 2-selenouridine synthase [EC:2.9.1.3] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00581 1 Rhodanese-like domain

Annotations of the 103 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein MJ0052 1
tRNA 2-selenouridine synthase 102

Protein length

Min length 360
Max length 362
Mean length (sd) 360.3 (0.8)
Median length 360.0

Protein length distribution