Orthogroup:group_1518


Homologs in group_1518

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09405 FBDBKF_09405 Morganella morganii S1 potC spermidine/putrescine ABC transporter permease PotC
EHELCC_10005 EHELCC_10005 Morganella morganii S2 potC spermidine/putrescine ABC transporter permease PotC
NLDBIP_10350 NLDBIP_10350 Morganella morganii S4 potC spermidine/putrescine ABC transporter permease PotC
LHKJJB_11005 LHKJJB_11005 Morganella morganii S3 potC spermidine/putrescine ABC transporter permease PotC
HKOGLL_14065 HKOGLL_14065 Morganella morganii S5 potC spermidine/putrescine ABC transporter permease PotC
F4V73_RS10560 F4V73_RS10560 Morganella psychrotolerans potC spermidine/putrescine ABC transporter permease PotC
PMI_RS13480 PMI_RS13480 Proteus mirabilis HI4320 potC spermidine/putrescine ABC transporter permease PotC

Distribution of group_1518 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1518 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1518

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1518.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 potC 7

Product

# Product Occurence
1 spermidine/putrescine ABC transporter permease PotC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1177 7 E Amino acid transport and metabolism (E) ABC-type spermidine/putrescine transport system, permease component II

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11070 7 spermidine/putrescine transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 91 SwissProt hits

Annotation Number of occurrences
Alpha-glucoside transport system permease protein AglG 1
Arabinooligosaccharides transport system permease protein AraQ 1
Carnitine transport permease protein OpuCD 2
Choline transport system permease protein OpuBD 1
D-methionine transport system permease protein MetI 5
Diacetylchitobiose uptake system permease protein DasC 1
Diacetylchitobiose uptake system permease protein NgcG 1
Galactooligosaccharides transport system permease protein GanQ 1
Glycine betaine/carnitine/choline transport system permease protein OpuCD 1
Inner membrane ABC transporter permease protein YcjP 1
Inner membrane ABC transporter permease protein YdcU 1
Inner membrane ABC transporter permease protein YdcV 2
Maltodextrin transport system permease protein MalD 2
Maltodextrin transport system permease protein MdxG 1
Maltose/maltodextrin transport system permease protein MalG 9
Molybdate/tungstate transport system permease protein WtpB 6
Molybdenum transport system permease protein ModB 3
Osmoprotective compounds uptake permease protein GgtD 1
Probable ABC transporter permease protein PH1036 1
Probable ABC transporter permease protein YesQ 1
Probable ABC transporter permease protein YurM 1
Probable ABC transporter permease protein y4fN 1
Probable D-methionine transport system permease protein MetI 1
Probable molybdenum ABC transporter permease protein HVO_B0370 1
Probable starch degradation products transport system permease protein AmyC 1
Probable sulfate transport system permease protein cysT 8
Putative 2-aminoethylphosphonate transport system permease protein PhnU 4
Putative 2-aminoethylphosphonate transport system permease protein PhnV 4
Putative ABC transporter permease protein ORF1 (Fragment) 1
Putative ABC transporter permease protein ORF2 1
Putrescine transport system permease protein PotH 1
Putrescine transport system permease protein PotI 2
Spermidine/putrescine transport system permease protein PotB 6
Spermidine/putrescine transport system permease protein PotC 5
Spermidine/putrescine transport system permease protein PotC homolog 2
Sulfate permease 2, chloroplastic 1
Sulfate transport system permease protein CysT 3
Sulfate transport system permease protein CysW 2
Sulfoquinovosyl glycerol transport system permease protein SmoH 1
Trehalose transport system permease protein SugB 2
Trehalose/maltose transport system permease protein MalG 1

Protein length

Min length 259
Max length 260
Mean length (sd) 259.9 (0.4)
Median length 260.0

Protein length distribution