COG3154


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3154, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG3154 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1417 FBDBKF_08755 133254 133775 1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S1
1 group_1417 EHELCC_12770 29950 30471 -1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S2
2 group_1417 NLDBIP_13110 29950 30471 -1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S4
3 group_1417 LHKJJB_13445 131972 132493 1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S3
4 group_1417 HKOGLL_11585 29950 30471 -1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S5
5 group_1417 F4V73_RS09970 101316 101837 1 SCP2 domain-containing protein Morganella psychrotolerans
6 group_1417 PMI_RS17160 3774627 3775160 1 SCP2 domain-containing protein Proteus mirabilis HI4320