Orthogroup:group_1440


Homologs in group_1440

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09095 FBDBKF_09095 Morganella morganii S1 recA SOS response regulatory protein OraA/RecX, interacts with RecA
EHELCC_10315 EHELCC_10315 Morganella morganii S2 recA SOS response regulatory protein OraA/RecX, interacts with RecA
NLDBIP_10660 NLDBIP_10660 Morganella morganii S4 recA SOS response regulatory protein OraA/RecX, interacts with RecA
LHKJJB_10695 LHKJJB_10695 Morganella morganii S3 recA SOS response regulatory protein OraA/RecX, interacts with RecA
HKOGLL_13755 HKOGLL_13755 Morganella morganii S5 recA SOS response regulatory protein OraA/RecX, interacts with RecA
F4V73_RS10855 F4V73_RS10855 Morganella psychrotolerans - regulatory protein RecX
PMI_RS13120 PMI_RS13120 Proteus mirabilis HI4320 - regulatory protein RecX

Distribution of group_1440 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1440 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1440

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1440.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 recA 5
2 - 2

Product

# Product Occurence
1 SOS response regulatory protein OraA/RecX, interacts with RecA 5
2 regulatory protein RecX 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2137 7 O Posttranslational modification, protein turnover, chaperones (O) SOS response regulatory protein OraA/RecX, interacts with RecA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03565 7 regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02631 7 RecX, second three-helix domain
PF21981 7 RecX, third three-helix domain

Annotations of the 152 SwissProt hits

Annotation Number of occurrences
Regulatory protein RecX 152

Protein length

Min length 151
Max length 153
Mean length (sd) 151.3 (0.8)
Median length 151.0

Protein length distribution