COG2105


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2105, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG2105 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1384 FBDBKF_08550 93443 93805 1 ytfP putative gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family Morganella morganii S1
1 group_1384 EHELCC_12975 69920 70282 -1 ytfP putative gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family Morganella morganii S2
2 group_1384 NLDBIP_13315 69920 70282 -1 ytfP putative gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family Morganella morganii S4
3 group_1384 LHKJJB_13240 92161 92523 1 ytfP putative gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family Morganella morganii S3
4 group_1384 HKOGLL_11790 69920 70282 -1 ytfP putative gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family Morganella morganii S5
5 group_1384 F4V73_RS09775 59904 60266 1 gamma-glutamylcyclotransferase Morganella psychrotolerans
6 group_1384 PMI_RS16885 3720563 3720910 1 gamma-glutamylcyclotransferase Proteus mirabilis HI4320