Orthogroup:group_1343


Homologs in group_1343

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08325 FBDBKF_08325 Morganella morganii S1 hemC hydroxymethylbilane synthase
EHELCC_13200 EHELCC_13200 Morganella morganii S2 hemC hydroxymethylbilane synthase
NLDBIP_13540 NLDBIP_13540 Morganella morganii S4 hemC hydroxymethylbilane synthase
LHKJJB_13015 LHKJJB_13015 Morganella morganii S3 hemC hydroxymethylbilane synthase
HKOGLL_12015 HKOGLL_12015 Morganella morganii S5 hemC hydroxymethylbilane synthase
F4V73_RS09525 F4V73_RS09525 Morganella psychrotolerans hemC hydroxymethylbilane synthase
PMI_RS16580 PMI_RS16580 Proteus mirabilis HI4320 hemC hydroxymethylbilane synthase

Distribution of group_1343 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1343 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1343

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1343.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hemC 7

Product

# Product Occurence
1 hydroxymethylbilane synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0181 7 H Coenzyme transport and metabolism (H) Porphobilinogen deaminase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01379 7 Porphobilinogen deaminase, dipyromethane cofactor binding domain
PF03900 7 Porphobilinogen deaminase, C-terminal domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013198 7 hydroxymethylbilane synthase VF0758 Nutritional/Metabolic factor

Annotations of the 477 SwissProt hits

Annotation Number of occurrences
Porphobilinogen deaminase 432
Porphobilinogen deaminase (Fragment) 2
Porphobilinogen deaminase 1 2
Porphobilinogen deaminase 2 2
Porphobilinogen deaminase, chloroplastic 4
Probable porphobilinogen deaminase 35

Protein length

Unique protein length 313

Protein length distribution