Orthogroup:group_1290


Homologs in group_1290

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07850 FBDBKF_07850 Morganella morganii S1 yjiA GTPase
EHELCC_13680 EHELCC_13680 Morganella morganii S2 yjiA GTPase
NLDBIP_14125 NLDBIP_14125 Morganella morganii S4 yjiA GTPase
LHKJJB_08725 LHKJJB_08725 Morganella morganii S3 yjiA GTPase
HKOGLL_08275 HKOGLL_08275 Morganella morganii S5 yjiA GTPase
F4V73_RS13190 F4V73_RS13190 Morganella psychrotolerans yjiA GTPase
PMI_RS00695 PMI_RS00695 Proteus mirabilis HI4320 yjiA GTPase

Distribution of group_1290 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1290 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1290

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1290.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yjiA 7

Product

# Product Occurence
1 GTPase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0523 7 R General function prediction only (R) Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02492 7 CobW/HypB/UreG, nucleotide-binding domain
PF07683 7 Cobalamin synthesis protein cobW C-terminal domain

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein in trpE 3'region (Fragment) 1
Zinc chaperone CobW 2
Zinc chaperone P47K 1
Zinc chaperone YciC 1
Zinc chaperone YeiR 1
Zinc chaperone YjiA 1
Zinc-regulated GTPase metalloprotein activator 1 6
Zinc-regulated GTPase metalloprotein activator 1A 1
Zinc-regulated GTPase metalloprotein activator 1B 1
Zinc-regulated GTPase metalloprotein activator 1C 1
Zinc-regulated GTPase metalloprotein activator 1E 1
Zinc-regulated GTPase metalloprotein activator 1F 1

Protein length

Min length 319
Max length 325
Mean length (sd) 319.9 (2.3)
Median length 319.0

Protein length distribution