Homologs in group_1231

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07170 FBDBKF_07170 39.9 Morganella morganii S1 comEC DNA internalization-related competence protein ComEC/Rec2
EHELCC_03800 EHELCC_03800 39.9 Morganella morganii S2 comEC DNA internalization-related competence protein ComEC/Rec2
NLDBIP_03800 NLDBIP_03800 39.9 Morganella morganii S4 comEC DNA internalization-related competence protein ComEC/Rec2
LHKJJB_09630 LHKJJB_09630 39.9 Morganella morganii S3 comEC DNA internalization-related competence protein ComEC/Rec2
HKOGLL_09345 HKOGLL_09345 39.9 Morganella morganii S5 comEC DNA internalization-related competence protein ComEC/Rec2
F4V73_RS01355 F4V73_RS01355 40.5 Morganella psychrotolerans - DNA internalization-related competence protein ComEC/Rec2

Distribution of the homologs in the orthogroup group_1231

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1231

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37443 9.92e-152 464 36 11 766 4 ycaI Uncharacterized protein YcaI Escherichia coli (strain K12)
P44408 1.58e-104 342 31 17 798 4 rec2 Recombination protein 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P51973 4.36e-47 182 26 21 639 4 comA Competence protein ComA Neisseria gonorrhoeae
P39695 5.76e-38 155 27 20 585 2 comEC ComE operon protein 3 Bacillus subtilis (strain 168)
O67545 0.000161 48 31 5 143 4 aq_1618 Uncharacterized protein aq_1618 Aquifex aeolicus (strain VF5)
B8F6A3 0.000262 47 30 1 70 3 gloB Hydroxyacylglutathione hydrolase Glaesserella parasuis serovar 5 (strain SH0165)
C5BEP2 0.000301 47 27 1 68 3 gloB Hydroxyacylglutathione hydrolase Edwardsiella ictaluri (strain 93-146)
Q65U07 0.000354 46 48 0 37 3 gloB Hydroxyacylglutathione hydrolase Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03525
Feature type CDS
Gene -
Product DNA internalization-related competence protein ComEC/Rec2
Location 786165 - 788534 (strand: 1)
Length 2370 (nucleotides) / 789 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1231
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00753 Metallo-beta-lactamase superfamily
PF03772 Competence protein
PF13567 Domain of unknown function (DUF4131)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2333 Intracellular trafficking, secretion, and vesicular transport (U) U DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02238 competence protein ComEC - -

Protein Sequence

MILLAKIKYIYRNKIALIKWHYLYAKYIAMLGLKPLNIDYLAVIIILSCLPLLIQRETLSLSLSYTLIIVGVLLYLIPFSYLRFLLLLLCFWCYANSTASSLMAKTSQLADTIATIESAILEYRRLPDSNIMIKVAIPKQHLFSAKLYANIYWRHPPKNVVVGQTWLFKIHFRAVHGYLNEGGFDSQKYAVSVRETLSGKILSATLTNSHLPIYTQFIHYLSSYWQATKNSGEITALVLGDKRGISAENKILYMKTGISHLIVISGLHIGLAALFGWLMARGVQYLFPTQWINPQFPLVISLGCGVFYAALSGWGIPATRAIIGLTIWVLLHWRSGLFLPWQWAIWSAAVILLLDPLAILSASFWLSFSAVFAIIVWYWLYPLNKRFSQQKRWFVIRLIHLQLGLLIILLPFQYYLFGGGNLFSLLVNLWAVPIISFITVPLIMCGLFTAFLPVLQPIIWSWVDQSINWAFFCAPYFLTYWQPCGAVPWLFALSGIMTLLVIKMSWWRHHVIILITIATFLYCELSFSKRYDWRITMLDIGHGLAIIIEKEGEAVIYDTGIRWKSGGTIAKNVIIPYLTHHRLQPVAMIISHDHLDHTGGIDDLLRAYPKLTIRSSFDNPQHLPCLQGGVWQWKDLTFNALWPLTLSRSPKNNDSCVISLTDGNSVILLTGDLEKEGEAQLLRRKKAYLKADILQVPHHGSQTSSTLAFIQAISPKYALVSAARYSPWRLPSDKVHNRYKKEAIDWLTTSINGQISIEFKHGKIDVVTYRRDILPRWYHQWFGVLTFPE

Flanking regions ( +/- flanking 50bp)

ATTTAACAGCATGATATTACAAGGAAAAATTAATTATATGGATGTAAAATATGATTTTATTAGCCAAGATAAAATATATTTATAGAAATAAAATAGCGTTAATAAAATGGCATTATCTATATGCTAAATATATTGCAATGCTAGGGCTAAAACCTCTTAATATAGATTATCTTGCCGTTATCATTATATTAAGTTGCTTACCTTTACTTATTCAACGTGAAACACTGAGTTTATCTCTGAGCTATACACTGATTATCGTAGGGGTATTATTATATTTAATTCCTTTTTCATACTTACGTTTTTTGTTGCTATTACTCTGTTTTTGGTGCTATGCAAACAGTACTGCCTCCTCTTTAATGGCCAAAACCTCTCAACTTGCTGACACCATTGCCACAATAGAAAGCGCAATTCTAGAATATCGTCGCTTGCCGGATAGCAATATAATGATTAAAGTTGCTATTCCTAAACAGCATCTCTTTTCTGCTAAGCTCTATGCCAATATATATTGGCGTCATCCGCCTAAAAATGTCGTAGTCGGGCAAACATGGCTGTTTAAAATTCACTTTCGTGCAGTACATGGTTATTTAAATGAGGGAGGATTTGACAGCCAAAAATATGCCGTTTCAGTAAGAGAAACATTGTCAGGAAAAATATTATCAGCCACATTAACGAATTCTCACCTTCCTATTTATACTCAATTTATTCACTATCTTTCATCTTATTGGCAAGCCACAAAAAATAGTGGTGAAATCACAGCATTAGTGTTAGGTGATAAACGAGGTATTTCTGCCGAAAATAAAATACTTTATATGAAAACAGGTATTTCGCACCTTATTGTGATTTCAGGGCTGCATATTGGCCTTGCTGCTCTGTTTGGTTGGCTGATGGCGAGAGGAGTACAATATCTTTTCCCAACGCAATGGATTAACCCACAATTTCCTTTGGTTATTAGTTTAGGTTGTGGTGTTTTTTATGCGGCTTTATCAGGATGGGGGATCCCCGCAACCAGAGCGATAATAGGCCTAACTATTTGGGTTTTACTCCATTGGCGTAGTGGACTTTTTTTACCTTGGCAGTGGGCGATTTGGAGTGCGGCAGTGATTTTATTGCTTGATCCGCTTGCCATATTATCCGCTAGTTTTTGGTTATCCTTTTCTGCGGTATTTGCCATCATTGTTTGGTATTGGCTCTATCCATTAAATAAAAGATTTAGCCAGCAAAAACGTTGGTTTGTTATTAGACTCATTCATTTGCAACTAGGGCTATTGATCATCTTATTACCTTTTCAATACTACTTATTTGGTGGTGGTAATCTTTTTAGCTTGCTTGTTAATTTATGGGCTGTGCCTATTATTTCGTTTATTACCGTACCACTTATTATGTGTGGGCTATTTACTGCCTTTTTACCTGTTCTACAACCTATTATTTGGTCATGGGTTGATCAGTCTATCAATTGGGCATTTTTCTGTGCGCCTTATTTTCTTACGTATTGGCAACCCTGTGGCGCTGTCCCCTGGTTATTTGCATTAAGCGGTATTATGACTCTTTTAGTTATCAAAATGAGCTGGTGGCGTCATCATGTGATTATTTTGATCACTATTGCTACTTTTTTATATTGTGAACTGTCTTTCTCTAAACGTTATGATTGGCGAATAACCATGTTAGATATTGGACATGGTTTAGCTATTATTATTGAAAAAGAGGGAGAAGCGGTTATCTATGACACAGGGATACGCTGGAAAAGTGGTGGCACTATTGCTAAAAATGTCATTATTCCCTATCTAACGCATCATCGATTACAGCCTGTTGCCATGATAATTAGCCATGATCACCTTGATCATACTGGTGGTATTGACGACTTATTACGTGCTTATCCCAAGTTAACTATCCGTAGTAGCTTTGACAATCCCCAACATTTACCGTGCTTACAAGGGGGAGTATGGCAATGGAAAGACCTTACTTTCAACGCGCTCTGGCCGCTGACATTATCTCGTTCACCTAAAAATAATGATTCTTGTGTGATTTCATTAACGGATGGTAACAGTGTTATTTTATTAACAGGCGATCTGGAAAAAGAGGGGGAAGCACAATTACTGAGAAGGAAAAAAGCCTATTTAAAAGCGGATATTTTGCAAGTTCCTCATCATGGTAGCCAAACATCATCCACATTGGCGTTTATTCAAGCAATATCACCAAAATATGCACTAGTTTCTGCTGCACGTTATAGCCCTTGGCGTTTACCTTCTGATAAAGTACATAACCGTTATAAAAAAGAGGCCATTGATTGGCTAACAACATCGATAAATGGGCAAATTTCTATCGAGTTTAAACACGGAAAGATTGATGTAGTCACCTATAGACGAGATATTTTACCTCGTTGGTATCATCAGTGGTTTGGTGTTTTGACGTTTCCCGAGTAGAATAGCCCGCTATTTATTAAAAGTTTGGTAATATATATGAATGATATAGA