Homologs in group_1231

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07170 FBDBKF_07170 71.8 Morganella morganii S1 comEC DNA internalization-related competence protein ComEC/Rec2
EHELCC_03800 EHELCC_03800 71.8 Morganella morganii S2 comEC DNA internalization-related competence protein ComEC/Rec2
NLDBIP_03800 NLDBIP_03800 71.8 Morganella morganii S4 comEC DNA internalization-related competence protein ComEC/Rec2
LHKJJB_09630 LHKJJB_09630 71.8 Morganella morganii S3 comEC DNA internalization-related competence protein ComEC/Rec2
HKOGLL_09345 HKOGLL_09345 71.8 Morganella morganii S5 comEC DNA internalization-related competence protein ComEC/Rec2
PMI_RS03525 PMI_RS03525 40.5 Proteus mirabilis HI4320 - DNA internalization-related competence protein ComEC/Rec2

Distribution of the homologs in the orthogroup group_1231

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1231

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37443 3.58e-129 405 33 10 760 4 ycaI Uncharacterized protein YcaI Escherichia coli (strain K12)
P44408 9.24e-96 318 32 18 689 4 rec2 Recombination protein 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P51973 2.23e-41 165 30 20 541 4 comA Competence protein ComA Neisseria gonorrhoeae
P39695 2.08e-27 122 24 20 586 2 comEC ComE operon protein 3 Bacillus subtilis (strain 168)
O67545 6.32e-07 56 27 5 176 4 aq_1618 Uncharacterized protein aq_1618 Aquifex aeolicus (strain VF5)
Q65U07 7.75e-05 48 46 0 45 3 gloB Hydroxyacylglutathione hydrolase Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
A6VNK4 0.000282 46 33 0 53 3 gloB Hydroxyacylglutathione hydrolase Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
C6DC67 0.000511 46 33 2 74 3 gloB Hydroxyacylglutathione hydrolase Pectobacterium carotovorum subsp. carotovorum (strain PC1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01355
Feature type CDS
Gene -
Product DNA internalization-related competence protein ComEC/Rec2
Location 294766 - 297093 (strand: 1)
Length 2328 (nucleotides) / 775 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1231
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00753 Metallo-beta-lactamase superfamily
PF03772 Competence protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2333 Intracellular trafficking, secretion, and vesicular transport (U) U DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02238 competence protein ComEC - -

Protein Sequence

MFISVALKYLFPYPLPLWLAAAAVLVGHAPLLVLPGLLSQTELLYLSVILCFLFFIRNRSSIFIQITISIFLIVNIQLNNTLSLFSTDNKNLSHIDVIVHDVIIKATGFYSVKGKIVNINDKKINDDIYINIKTKGSFVPECAGEVWRIFRPVLRPVHKQLNEGQPDRQQHALSQRVLFSLTPGRSKKISSVCNLRQRVIAEYFPQTDNFVQSGLMLALLFGERRGITPQQRMLVQETGVAHVVAISGLHIGLAALWGWWAGRIILLVLAQRLMSHFIPVLFSVCAAVAYVWLAGFAVPACRALTVLLLWHLMRWNHYVLPAYQFVFISAALLLLIDPLTILSASFWLSFIAVTALLFWHHTGVRQATTGRITRRERFWRNIRGFLSYQWGLFLLLLPVQASFFGGVNFLSLLSNLWVIPVISFLSVPLLFSAITAALFLPVTVTGFIWQAADYSLGLALWPLPFLSSFWLITGHVSLFWTAIVWGCVCFIRQDLWRQHPVLLPGMIICCCLYLRKTPVPDWSVTLLDIGHGLAVVVEKEGRAVVYDTGNRMGHSDDAQRVILPYLRYHRLIPDWIIISHDHQDHTGGLETLRRYYPPATVKGNIPRADTACERGERWVWQSLYFEVLWPDGKYQKSKNDGSCVIRISDGKYQVLLTGDIEKQAEMQLVKSEKRLSATVLQVPHHGSNTSSTESFIRAVNPGFALVSVARYSPWRLPSDKVQRRYRHNGTDWHDTARSGQITVHFFNDDIALVTYRHHLSARWFSAWFGDQPING

Flanking regions ( +/- flanking 50bp)

GAAAACCATTCTCATCATAATAAATACTGATAACACATTTGGTGAGATATATGTTCATTTCTGTTGCTCTGAAATACCTTTTTCCATATCCGTTACCGCTTTGGCTGGCAGCCGCTGCTGTACTGGTCGGACATGCCCCGCTGCTGGTGTTGCCAGGGTTATTGTCACAGACTGAGCTATTGTATCTGTCTGTCATATTATGTTTTCTTTTTTTTATCCGTAACCGGAGTAGTATATTTATACAAATAACAATAAGTATTTTTTTAATAGTTAATATTCAACTGAATAATACATTGTCACTATTTTCAACTGATAATAAAAACCTAAGTCATATAGATGTTATAGTTCATGATGTTATTATTAAAGCAACTGGATTTTACTCGGTGAAAGGGAAGATTGTAAATATTAACGATAAAAAAATTAATGATGATATTTATATAAATATAAAAACAAAAGGCTCATTTGTGCCGGAATGTGCCGGTGAAGTCTGGCGTATATTCAGACCTGTTTTACGCCCTGTCCACAAGCAATTAAATGAAGGGCAACCTGACCGGCAACAGCATGCACTGTCTCAGCGGGTCTTATTTTCTCTGACCCCGGGGCGCAGTAAGAAAATATCGTCAGTATGTAATCTGCGCCAGCGGGTCATTGCTGAATATTTTCCGCAGACAGATAACTTTGTGCAGAGCGGGCTGATGCTGGCTCTGCTCTTCGGGGAGCGCAGGGGGATTACACCACAACAACGAATGCTGGTGCAGGAAACGGGTGTTGCTCATGTGGTGGCAATTTCAGGTCTGCATATCGGGCTTGCTGCATTATGGGGCTGGTGGGCGGGGCGCATAATCTTACTGGTGCTGGCGCAGCGATTGATGTCACATTTTATTCCTGTGTTATTTTCTGTCTGTGCGGCAGTGGCTTATGTCTGGCTGGCGGGATTTGCTGTTCCTGCCTGCCGGGCGCTTACGGTACTGCTGCTGTGGCATCTGATGAGATGGAATCATTATGTATTACCTGCATATCAGTTTGTATTTATCAGCGCAGCACTGTTGTTGTTAATCGATCCTCTGACCATCCTTTCCGCCAGTTTCTGGCTGTCATTTATTGCCGTTACTGCGCTGTTGTTCTGGCACCATACCGGTGTACGGCAGGCAACGACCGGGAGGATTACCCGCCGCGAGCGCTTTTGGCGCAATATCCGTGGCTTTTTATCCTATCAGTGGGGATTATTTCTGCTTTTGCTGCCGGTGCAGGCGTCTTTCTTCGGCGGTGTCAATTTTCTCTCATTGCTGAGCAACCTGTGGGTTATTCCTGTTATCTCTTTTTTATCCGTACCTTTACTTTTTTCCGCTATTACAGCGGCGTTGTTTCTGCCGGTCACAGTGACCGGGTTTATCTGGCAGGCGGCTGATTACTCTCTCGGGCTGGCATTGTGGCCGTTGCCGTTTCTGTCCTCGTTCTGGCTGATAACCGGGCATGTATCTCTGTTCTGGACAGCTATTGTATGGGGATGTGTCTGTTTTATCCGGCAGGATCTCTGGCGTCAGCATCCGGTATTGCTGCCGGGAATGATTATCTGTTGCTGTTTATATCTGCGGAAAACCCCCGTGCCGGACTGGTCGGTGACATTGCTGGATATCGGACACGGGCTGGCGGTGGTTGTCGAAAAAGAAGGCAGGGCGGTTGTGTATGATACCGGCAACCGGATGGGGCACAGTGACGATGCTCAGCGGGTGATCCTGCCTTATCTGCGGTATCACCGCCTGATACCGGACTGGATTATTATCAGCCACGACCATCAGGATCATACCGGCGGGCTGGAAACATTACGCCGCTATTATCCGCCTGCAACTGTAAAAGGTAATATCCCGCGGGCAGATACGGCGTGTGAGCGGGGTGAACGCTGGGTCTGGCAATCGTTATATTTCGAGGTGTTATGGCCGGACGGAAAGTATCAGAAAAGCAAAAATGACGGCTCGTGTGTTATCCGCATCAGTGACGGAAAATATCAGGTTTTGCTGACCGGTGATATTGAAAAGCAAGCTGAAATGCAGTTGGTTAAGTCAGAAAAGAGGCTGTCAGCCACGGTATTGCAAGTTCCGCACCATGGCAGTAATACCTCATCAACAGAATCTTTTATTCGTGCGGTGAATCCCGGTTTTGCACTGGTGTCTGTTGCCCGCTATAGCCCGTGGCGCCTGCCCTCTGATAAAGTACAGCGCCGCTATCGTCATAACGGCACGGACTGGCACGATACCGCGCGCAGCGGTCAGATTACTGTGCATTTTTTTAATGATGATATAGCGCTGGTGACATATCGTCATCATCTGTCCGCCCGCTGGTTCAGTGCATGGTTTGGTGATCAGCCGATAAACGGGTAATATAGGCAGCTAATTTTTAGTATTGGTAAACGCAATAATGAAAGATATTG