Orthogroup:group_1187


Homologs in group_1187

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06845 FBDBKF_06845 Morganella morganii S1 asmA outer membrane assembly protein AsmA
EHELCC_04125 EHELCC_04125 Morganella morganii S2 asmA outer membrane assembly protein AsmA
NLDBIP_04125 NLDBIP_04125 Morganella morganii S4 asmA outer membrane assembly protein AsmA
LHKJJB_09955 LHKJJB_09955 Morganella morganii S3 asmA outer membrane assembly protein AsmA
HKOGLL_09020 HKOGLL_09020 Morganella morganii S5 asmA outer membrane assembly protein AsmA
F4V73_RS00995 F4V73_RS00995 Morganella psychrotolerans asmA outer membrane assembly protein AsmA
PMI_RS03205 PMI_RS03205 Proteus mirabilis HI4320 asmA outer membrane assembly protein AsmA

Distribution of group_1187 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1187 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1187

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1187.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 asmA 7

Product

# Product Occurence
1 outer membrane assembly protein AsmA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2982 7 M Cell wall/membrane/envelope biogenesis (M) Uncharacterized conserved protein AsmA involved in outer membrane biogenesis

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07289 7 AsmA protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05170 7 AsmA family
PF13502 1 AsmA-like C-terminal region

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Protein AsmA 1

Protein length

Min length 620
Max length 643
Mean length (sd) 623.9 (8.6)
Median length 620.0

Protein length distribution