Orthogroup:group_1062


Homologs in group_1062

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06010 FBDBKF_06010 Morganella morganii S1 rpsB 30S ribosomal protein S2
EHELCC_09055 EHELCC_09055 Morganella morganii S2 rpsB 30S ribosomal protein S2
NLDBIP_09435 NLDBIP_09435 Morganella morganii S4 rpsB 30S ribosomal protein S2
LHKJJB_08320 LHKJJB_08320 Morganella morganii S3 rpsB 30S ribosomal protein S2
HKOGLL_07870 HKOGLL_07870 Morganella morganii S5 rpsB 30S ribosomal protein S2
F4V73_RS15885 F4V73_RS15885 Morganella psychrotolerans rpsB 30S ribosomal protein S2
PMI_RS11285 PMI_RS11285 Proteus mirabilis HI4320 rpsB 30S ribosomal protein S2

Distribution of group_1062 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1062 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1062

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1062.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsB 7

Product

# Product Occurence
1 30S ribosomal protein S2 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0052 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S2

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02967 7 small subunit ribosomal protein S2 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00318 7 Ribosomal protein S2

Annotations of the 526 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein uS2 526

Protein length

Min length 239
Max length 241
Mean length (sd) 239.3 (0.8)
Median length 239.0

Protein length distribution