Orthogroup:group_1014



Homologs in group_1014

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05665 FBDBKF_05665 Morganella morganii S1 tyrS tyrosine--tRNA ligase
EHELCC_11925 EHELCC_11925 Morganella morganii S2 tyrS tyrosine--tRNA ligase
NLDBIP_12265 NLDBIP_12265 Morganella morganii S4 tyrS tyrosine--tRNA ligase
LHKJJB_12125 LHKJJB_12125 Morganella morganii S3 tyrS tyrosine--tRNA ligase
HKOGLL_10740 HKOGLL_10740 Morganella morganii S5 tyrS tyrosine--tRNA ligase
F4V73_RS03640 F4V73_RS03640 Morganella psychrotolerans tyrS tyrosine--tRNA ligase
PMI_RS06695 PMI_RS06695 Proteus mirabilis HI4320 tyrS tyrosine--tRNA ligase

Distribution of group_1014 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1014 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1014

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1014.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tyrS 7

Product

# Product Occurence
1 tyrosine--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0162 7 J Translation, ribosomal structure and biogenesis (J) Tyrosyl-tRNA synthetase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01866 7 tyrosyl-tRNA synthetase [EC:6.1.1.1] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00579 7 tRNA synthetases class I (W and Y)
PF22421 7 Tyrosine--tRNA ligase SYY-like C-terminal domain

Annotations of the 489 SwissProt hits

Annotation Number of occurrences
Probable tyrosine--tRNA ligase, mitochondrial 1
Tyrosine--tRNA ligase 442
Tyrosine--tRNA ligase 1 19
Tyrosine--tRNA ligase 2 18
Tyrosine--tRNA ligase, chloroplastic/mitochondrial 1
Tyrosine--tRNA ligase, mitochondrial 8

Protein length

Unique protein length 424

Protein length distribution