Homologs in group_3695

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS04640 PMI_RS04640 38.8 Proteus mirabilis HI4320 - AAA family ATPase
PMI_RS06995 PMI_RS06995 31.6 Proteus mirabilis HI4320 - ATP-binding protein
PMI_RS11650 PMI_RS11650 32.2 Proteus mirabilis HI4320 - AAA family ATPase

Distribution of the homologs in the orthogroup group_3695

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3695

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03754 2.51e-15 75 33 0 96 4 ea59 Protein ea59 Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS19510
Feature type CDS
Gene -
Product AAA family ATPase
Location 369937 - 370389 (strand: -1)
Length 453 (nucleotides) / 150 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3695
Orthogroup size 4
N. genomes 1

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Genomic region

Domains

PF13175 AAA ATPase domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3593 Replication, recombination and repair (L) L Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains

Protein Sequence

MTEIIANIRYDSLIIFDEPETHLHPNAISQLINSIHSLADQFKSYCIIAPHSPIIVQGILSKNIFVIKNENKVLSVTHPSLETFGENLSKITDDIFGARDTPQYFRKKIEDQIKIGYSIDDIRKSIQSDGVPLSLNLSILLQNMEIKNND

Flanking regions ( +/- flanking 50bp)

AAAATCAATAAAAAAAATTAAGCTCAGGGCAAGCTATTTTCTTATATATTATGACTGAAATTATTGCTAATATAAGATATGACTCATTAATAATTTTTGATGAACCAGAAACACACTTACACCCTAATGCCATATCTCAGTTAATTAATAGCATTCACTCTCTTGCTGATCAATTTAAATCTTACTGTATAATAGCACCCCATTCTCCAATTATTGTTCAAGGGATTTTATCTAAAAATATTTTTGTCATAAAAAATGAAAATAAAGTATTAAGTGTAACACATCCATCGCTGGAAACATTTGGTGAAAACTTGTCAAAAATTACTGATGATATTTTCGGTGCGAGAGATACACCACAATATTTTAGAAAAAAAATAGAAGATCAAATTAAAATTGGATATAGTATTGATGATATTAGAAAATCCATTCAATCTGATGGAGTTCCTCTTAGTTTAAATCTTTCCATTTTATTACAAAACATGGAGATCAAAAATAATGATTAACTTAACTCCATATTCTGATTCTAGTATCTCTTTTTTACGTTCAATTATTA