Homologs in group_1346

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08340 FBDBKF_08340 50.0 Morganella morganii S1 yifL Small periplasmic lipoprotein YifL (function unknown)
EHELCC_13185 EHELCC_13185 50.0 Morganella morganii S2 yifL Small periplasmic lipoprotein YifL (function unknown)
NLDBIP_13525 NLDBIP_13525 50.0 Morganella morganii S4 yifL Small periplasmic lipoprotein YifL (function unknown)
LHKJJB_13030 LHKJJB_13030 50.0 Morganella morganii S3 yifL Small periplasmic lipoprotein YifL (function unknown)
HKOGLL_12000 HKOGLL_12000 50.0 Morganella morganii S5 yifL Small periplasmic lipoprotein YifL (function unknown)
F4V73_RS09540 F4V73_RS09540 41.8 Morganella psychrotolerans - lipoprotein

Distribution of the homologs in the orthogroup group_1346

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1346

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADN9 6.14e-10 52 51 1 49 3 yifL Uncharacterized lipoprotein YifL Shigella flexneri
P0ADN6 6.14e-10 52 51 1 49 1 yifL Uncharacterized lipoprotein YifL Escherichia coli (strain K12)
P0ADN7 6.14e-10 52 51 1 49 3 yifL Uncharacterized lipoprotein YifL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADN8 6.14e-10 52 51 1 49 3 yifL Uncharacterized lipoprotein YifL Escherichia coli O157:H7
P0A1T6 2.24e-09 50 46 1 49 3 yifL Uncharacterized lipoprotein YifL Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1T7 2.24e-09 50 46 1 49 3 yifL Uncharacterized lipoprotein YifL Salmonella typhi

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS19145
Feature type CDS
Gene -
Product lipoprotein
Location 3658245 - 3658412 (strand: 1)
Length 168 (nucleotides) / 55 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1346
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13627 Prokaryotic lipoprotein-attachment site

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5567 Function unknown (S) S Small periplasmic lipoprotein YifL (function unknown)

Protein Sequence

MKTYLRCTLAIITLISLSGCGLKGPLYFPPEDTQANMTQSSQPTQQVETSSTQNN

Flanking regions ( +/- flanking 50bp)

AACTGCGATTATAGAGGATATTAACCAAATTAATGATAGGCAGATTTCGAATGAAAACGTATTTACGTTGCACCCTTGCTATAATAACACTGATTTCTCTTTCTGGTTGTGGCTTGAAAGGCCCTCTCTATTTCCCGCCTGAAGATACTCAGGCAAATATGACTCAGTCATCCCAGCCAACCCAGCAAGTTGAGACTTCCTCAACACAAAACAATTAGTCAATATTAGAAACGGGACACCCGTTTCAGGCAGGGTTAAGATGCAATTT