COG5567


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5567, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Small periplasmic lipoprotein YifL (function unknown)
Function(s) descr. Function unknown (S)

Occurence in the database

COG5567 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1346 FBDBKF_08340 44011 44202 1 yifL Small periplasmic lipoprotein YifL (function unknown) Morganella morganii S1
1 group_1346 EHELCC_13185 119523 119714 -1 yifL Small periplasmic lipoprotein YifL (function unknown) Morganella morganii S2
2 group_1346 NLDBIP_13525 119523 119714 -1 yifL Small periplasmic lipoprotein YifL (function unknown) Morganella morganii S4
3 group_1346 LHKJJB_13030 42729 42920 1 yifL Small periplasmic lipoprotein YifL (function unknown) Morganella morganii S3
4 group_1346 HKOGLL_12000 119523 119714 -1 yifL Small periplasmic lipoprotein YifL (function unknown) Morganella morganii S5
5 group_1346 F4V73_RS09540 8692 8886 1 lipoprotein Morganella psychrotolerans
6 group_1346 PMI_RS19145 3658245 3658412 1 lipoprotein Proteus mirabilis HI4320