Homologs in group_1360

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08430 FBDBKF_08430 77.1 Morganella morganii S1 queG tRNA epoxyqueuosine(34) reductase QueG
EHELCC_13095 EHELCC_13095 77.1 Morganella morganii S2 queG tRNA epoxyqueuosine(34) reductase QueG
NLDBIP_13435 NLDBIP_13435 77.1 Morganella morganii S4 queG tRNA epoxyqueuosine(34) reductase QueG
LHKJJB_13120 LHKJJB_13120 77.1 Morganella morganii S3 queG tRNA epoxyqueuosine(34) reductase QueG
HKOGLL_11910 HKOGLL_11910 77.1 Morganella morganii S5 queG tRNA epoxyqueuosine(34) reductase QueG
F4V73_RS09650 F4V73_RS09650 78.1 Morganella psychrotolerans queG tRNA epoxyqueuosine(34) reductase QueG

Distribution of the homologs in the orthogroup group_1360

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1360

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CKM4 0.0 632 74 2 407 3 queG Epoxyqueuosine reductase Yersinia pestis
Q8ZKA8 0.0 599 73 1 381 3 queG Epoxyqueuosine reductase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q328E3 0.0 598 73 1 381 3 queG Epoxyqueuosine reductase Shigella dysenteriae serotype 1 (strain Sd197)
P39288 0.0 598 73 1 381 3 queG Epoxyqueuosine reductase Escherichia coli (strain K12)
Q8EAN7 0.0 514 64 3 382 3 queG Epoxyqueuosine reductase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q9KV16 1.97e-177 501 61 3 382 3 queG Epoxyqueuosine reductase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5E2C3 4e-174 492 60 3 382 3 queG Epoxyqueuosine reductase Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q9HUL4 7.03e-148 426 56 3 352 3 queG Epoxyqueuosine reductase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8P8E0 4.02e-127 372 52 3 346 3 queG Epoxyqueuosine reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q63WN0 6.65e-121 358 48 6 388 3 queG Epoxyqueuosine reductase Burkholderia pseudomallei (strain K96243)
F4G4E2 9.11e-120 354 49 3 359 3 queG Epoxyqueuosine reductase Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
F4BEN2 9.17e-103 311 47 6 348 3 queG Epoxyqueuosine reductase Francisella cf. novicida (strain Fx1)
E4RUV9 1.77e-80 251 42 5 312 3 queG Epoxyqueuosine reductase Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15)
G0J2F8 1.86e-79 249 41 7 325 3 queG Epoxyqueuosine reductase Cyclobacterium marinum (strain ATCC 25205 / DSM 745 / LMG 13164 / NCIMB 1802)
F7ZDR3 5.61e-77 244 42 3 305 3 queG Epoxyqueuosine reductase Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)
E6X4P3 5.52e-75 238 40 3 305 3 queG Epoxyqueuosine reductase Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)
Q8DLA9 6.42e-71 227 39 6 322 3 queG Epoxyqueuosine reductase Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
A6H1G2 8.94e-71 227 40 6 307 3 queG Epoxyqueuosine reductase Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86)
Q3ANP3 5.05e-63 207 37 6 316 3 queG Epoxyqueuosine reductase Synechococcus sp. (strain CC9605)
Q7NKL3 6.45e-60 199 38 7 321 3 queG Epoxyqueuosine reductase Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
P73526 6.48e-60 198 38 5 295 3 queG Epoxyqueuosine reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
D3ENT3 7.47e-60 199 35 7 316 3 queG Epoxyqueuosine reductase Atelocyanobacterium thalassa (isolate ALOHA)
A5GPV1 3e-58 195 35 7 314 3 queG Epoxyqueuosine reductase Synechococcus sp. (strain RCC307)
Q46I55 4.33e-53 181 34 7 314 3 queG Epoxyqueuosine reductase Prochlorococcus marinus (strain NATL2A)
Q81I72 1.34e-50 177 28 7 371 3 queG Epoxyqueuosine reductase Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81YT7 4.96e-50 175 28 7 371 3 queG Epoxyqueuosine reductase Bacillus anthracis
F9VEN7 1.49e-49 173 32 6 354 3 queG Epoxyqueuosine reductase Lactococcus garvieae (strain Lg2)
Q2FX88 2.54e-46 166 30 5 292 3 queG Epoxyqueuosine reductase Staphylococcus aureus (strain NCTC 8325 / PS 47)
P97030 1.07e-43 159 32 2 234 1 queG Epoxyqueuosine reductase Bacillus subtilis (strain 168)
Q834R1 3.28e-41 152 31 5 306 3 queG Epoxyqueuosine reductase Enterococcus faecalis (strain ATCC 700802 / V583)
Q8Y8H0 2.04e-39 147 29 4 292 3 queG Epoxyqueuosine reductase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P32815 1.42e-31 122 38 5 165 4 None Uncharacterized protein in gldA 3'region (Fragment) Geobacillus stearothermophilus
Q848J2 8.53e-06 51 25 6 186 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense
Q8L172 1.55e-05 50 25 6 186 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense (strain Y51)
Q8GJ31 1.93e-05 50 25 6 186 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense
Q8GJ27 2.82e-05 49 25 6 186 1 pceA Tetrachloroethene reductive dehalogenase Dehalobacter restrictus (strain DSM 9455 / PER-K23)
O68252 0.000804 45 37 2 75 1 pceA Tetrachloroethene reductive dehalogenase Sulfurospirillum multivorans

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16725
Feature type CDS
Gene queG
Product tRNA epoxyqueuosine(34) reductase QueG
Location 3686392 - 3687546 (strand: -1)
Length 1155 (nucleotides) / 384 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1360
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08331 Epoxyqueuosine reductase QueG, DUF1730
PF13484 4Fe-4S double cluster binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1600 Translation, ribosomal structure and biogenesis (J) J Epoxyqueuosine reductase QueG (queuosine biosynthesis)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18979 epoxyqueuosine reductase [EC:1.17.99.6] - -

Protein Sequence

MSSLDLHHLAQNIKRWGTELGFQQTGICDTDLSLEEPRLQAWLDKQYHGEMAWMAKYGMTRARPHELVPGTLRVISVRMNYLPTDAAFARTLNNPEQGYISRYALGRDYHKVLRQRLKKLGEKITQYCQQFEYQGIVNFRPFVDSAPIMERPLAVKAGLGWVGKHSLVINNQAGSWFFLGELLINLPLPIDSPVEEQCGKCVACMTTCPTGAIVEPYTIDARRCISYLTIELEGAIPEEFRPLMGNRIYGCDDCQLICPWNRFSSLTEEDDFSPRRALHTPELLDLFQWSEEKFLRITEGSPIRRIGYLRWLRNISVALGNAPYQDKIVLALQEHFGLGEVLDEHLHWAIAQQKAKREEKTLKIQTSQQKRLVRAITKGLPRDA

Flanking regions ( +/- flanking 50bp)

TACACTGCGCATTCTTAGGACTCACCTATTAGCTATTATTTCGGTTGCTCATGTCATCACTCGATCTTCATCACCTTGCTCAAAATATAAAACGTTGGGGAACTGAACTAGGATTCCAACAAACAGGAATTTGCGATACTGATTTATCGCTCGAAGAGCCTCGTTTACAAGCTTGGCTAGATAAACAGTATCATGGTGAAATGGCATGGATGGCTAAATATGGCATGACTCGAGCAAGACCCCATGAATTGGTGCCGGGTACATTGCGAGTGATCAGCGTCAGAATGAACTATTTGCCAACAGATGCTGCTTTTGCTCGTACCCTTAATAATCCAGAGCAAGGCTATATTAGCCGTTATGCATTGGGTAGAGATTATCACAAAGTATTAAGACAACGCCTTAAAAAATTAGGTGAAAAAATTACGCAATATTGCCAACAGTTTGAATATCAAGGTATTGTTAATTTTCGTCCTTTTGTTGATTCAGCGCCGATAATGGAACGACCATTGGCCGTGAAAGCTGGTCTTGGGTGGGTTGGTAAACACTCACTTGTTATCAATAATCAGGCCGGCTCTTGGTTTTTTCTCGGTGAATTATTAATTAATTTACCTTTGCCTATTGATTCTCCCGTTGAAGAGCAATGCGGTAAATGTGTAGCTTGCATGACCACTTGCCCAACAGGCGCCATCGTAGAGCCTTACACCATTGATGCTCGTCGCTGTATTTCTTACCTAACGATTGAACTTGAAGGCGCTATTCCTGAAGAATTTCGCCCTTTGATGGGCAATCGTATCTATGGTTGTGATGATTGCCAATTAATTTGCCCATGGAATCGTTTTTCTTCGCTCACAGAGGAAGATGATTTTTCTCCGCGCCGTGCCTTACATACACCAGAATTGCTGGATCTATTCCAATGGAGTGAAGAAAAATTTCTGCGTATTACAGAAGGTTCACCGATCCGACGAATTGGCTATTTACGTTGGCTAAGAAATATTAGTGTTGCGTTAGGCAATGCCCCTTATCAGGACAAAATTGTACTGGCCTTGCAAGAGCACTTTGGTTTAGGGGAGGTTTTAGATGAACATTTGCACTGGGCTATCGCCCAACAGAAAGCCAAAAGAGAAGAAAAAACACTAAAAATACAGACTTCACAACAAAAACGTCTAGTAAGGGCAATAACTAAGGGCCTACCTCGTGATGCTTAGTTTTTAACATGATACGCATACTCATAAGATGAGATAATTTCACCTGTGAA