Homologs in group_1360

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08430 FBDBKF_08430 91.9 Morganella morganii S1 queG tRNA epoxyqueuosine(34) reductase QueG
EHELCC_13095 EHELCC_13095 91.9 Morganella morganii S2 queG tRNA epoxyqueuosine(34) reductase QueG
NLDBIP_13435 NLDBIP_13435 91.9 Morganella morganii S4 queG tRNA epoxyqueuosine(34) reductase QueG
LHKJJB_13120 LHKJJB_13120 91.9 Morganella morganii S3 queG tRNA epoxyqueuosine(34) reductase QueG
HKOGLL_11910 HKOGLL_11910 91.9 Morganella morganii S5 queG tRNA epoxyqueuosine(34) reductase QueG
PMI_RS16725 PMI_RS16725 78.1 Proteus mirabilis HI4320 queG tRNA epoxyqueuosine(34) reductase QueG

Distribution of the homologs in the orthogroup group_1360

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1360

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CKM4 0.0 628 73 2 411 3 queG Epoxyqueuosine reductase Yersinia pestis
Q328E3 0.0 608 75 1 385 3 queG Epoxyqueuosine reductase Shigella dysenteriae serotype 1 (strain Sd197)
P39288 0.0 607 74 1 385 3 queG Epoxyqueuosine reductase Escherichia coli (strain K12)
Q8ZKA8 0.0 600 74 1 385 3 queG Epoxyqueuosine reductase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8EAN7 0.0 525 66 4 390 3 queG Epoxyqueuosine reductase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q9KV16 0.0 511 64 2 380 3 queG Epoxyqueuosine reductase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5E2C3 7.38e-179 504 61 2 380 3 queG Epoxyqueuosine reductase Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q9HUL4 2.81e-150 432 58 3 351 3 queG Epoxyqueuosine reductase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8P8E0 5.42e-134 390 55 3 350 3 queG Epoxyqueuosine reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
F4G4E2 5.71e-125 367 56 2 320 3 queG Epoxyqueuosine reductase Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
Q63WN0 1.71e-124 368 50 5 383 3 queG Epoxyqueuosine reductase Burkholderia pseudomallei (strain K96243)
F4BEN2 1.9e-100 305 46 9 355 3 queG Epoxyqueuosine reductase Francisella cf. novicida (strain Fx1)
E4RUV9 1.68e-80 252 42 6 313 3 queG Epoxyqueuosine reductase Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15)
F7ZDR3 6.67e-80 251 44 3 305 3 queG Epoxyqueuosine reductase Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)
E6X4P3 1.1e-77 244 42 6 309 3 queG Epoxyqueuosine reductase Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)
G0J2F8 2.44e-75 239 40 7 315 3 queG Epoxyqueuosine reductase Cyclobacterium marinum (strain ATCC 25205 / DSM 745 / LMG 13164 / NCIMB 1802)
Q8DLA9 4.4e-75 238 41 6 323 3 queG Epoxyqueuosine reductase Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
A6H1G2 8.61e-74 234 41 8 312 3 queG Epoxyqueuosine reductase Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86)
Q7NKL3 1.69e-66 216 41 6 318 3 queG Epoxyqueuosine reductase Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
P73526 1.05e-65 213 40 6 302 3 queG Epoxyqueuosine reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q3ANP3 3.11e-63 208 37 8 319 3 queG Epoxyqueuosine reductase Synechococcus sp. (strain CC9605)
D3ENT3 6.83e-61 201 35 7 317 3 queG Epoxyqueuosine reductase Atelocyanobacterium thalassa (isolate ALOHA)
A5GPV1 4.8e-59 197 36 7 314 3 queG Epoxyqueuosine reductase Synechococcus sp. (strain RCC307)
Q46I55 2.37e-58 195 34 7 322 3 queG Epoxyqueuosine reductase Prochlorococcus marinus (strain NATL2A)
F9VEN7 4.4e-50 174 32 8 351 3 queG Epoxyqueuosine reductase Lactococcus garvieae (strain Lg2)
Q81I72 1.75e-46 166 34 5 235 3 queG Epoxyqueuosine reductase Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81YT7 4.88e-46 165 34 5 235 3 queG Epoxyqueuosine reductase Bacillus anthracis
Q2FX88 1.41e-45 164 29 5 291 3 queG Epoxyqueuosine reductase Staphylococcus aureus (strain NCTC 8325 / PS 47)
P97030 5.24e-43 157 28 5 292 1 queG Epoxyqueuosine reductase Bacillus subtilis (strain 168)
Q834R1 7.09e-43 157 29 8 333 3 queG Epoxyqueuosine reductase Enterococcus faecalis (strain ATCC 700802 / V583)
Q8Y8H0 9.69e-38 142 28 8 302 3 queG Epoxyqueuosine reductase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P32815 1.02e-29 117 34 4 165 4 None Uncharacterized protein in gldA 3'region (Fragment) Geobacillus stearothermophilus
Q848J2 4.92e-05 48 26 5 136 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense
Q8GJ27 7.98e-05 48 26 5 139 1 pceA Tetrachloroethene reductive dehalogenase Dehalobacter restrictus (strain DSM 9455 / PER-K23)
Q8GJ31 7.98e-05 48 26 5 136 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense
Q8L172 8.05e-05 48 26 5 136 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense (strain Y51)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09650
Feature type CDS
Gene queG
Product tRNA epoxyqueuosine(34) reductase QueG
Location 31638 - 32795 (strand: -1)
Length 1158 (nucleotides) / 385 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1360
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08331 Epoxyqueuosine reductase QueG, DUF1730
PF13484 4Fe-4S double cluster binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1600 Translation, ribosomal structure and biogenesis (J) J Epoxyqueuosine reductase QueG (queuosine biosynthesis)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18979 epoxyqueuosine reductase [EC:1.17.99.6] - -

Protein Sequence

MSNSPDLHALAAQIKQWGNELGFQQVGICDTDLSAEEPKLQAWLDAGYQGEMDWMARHGMMRARPHELLPGTLRVISVRMNYLPAKAAFAATLQNPAQGYISRYALGRDYHKLLRQRLKQLGERIQAHCDTLTSDHSLSYRPFVDSAPVLERPLAAKAGLGWVGKHSLVLNRDAGSWFFLGELLINLPLPVDQPVEEQCGRCVACMTTCPTQAIVAPYTIDARRCISYLTIELEGAIPEEFRPLMGNRIYGCDDCQLICPWNRFSQLTDEDDFSPRKQLHTPELLTLFAWDEATFLRITEGSAIRRIGYLRWLRNISVALGNAPYEDNIVIALTEKKGLADWLDEHIDWAVACQYVKRDESGIEIQTSQQKRLIRAISKGLPRDA

Flanking regions ( +/- flanking 50bp)

CTCCGCCCCATTCCGGACCGCCCTCTGCATAGTAAGCAAGTACTCACATCATGAGCAATAGCCCCGATTTACACGCCCTCGCCGCACAGATAAAACAGTGGGGAAATGAACTTGGTTTTCAGCAGGTGGGTATCTGCGATACAGACCTCAGTGCCGAAGAGCCGAAACTGCAGGCGTGGCTGGATGCCGGGTATCAGGGAGAGATGGACTGGATGGCGCGCCACGGCATGATGCGCGCGCGCCCTCATGAATTACTGCCCGGCACGTTGCGTGTTATCAGTGTGCGGATGAACTATCTGCCTGCCAAAGCAGCATTTGCCGCCACACTGCAAAACCCCGCACAGGGTTATATCAGCCGGTATGCTCTGGGACGGGACTATCACAAGCTGTTGCGCCAACGGCTGAAACAGCTTGGTGAGCGTATTCAGGCACACTGCGATACGCTGACATCCGATCATTCCCTGAGTTACCGCCCGTTTGTTGATTCCGCGCCGGTACTCGAACGCCCTCTGGCAGCGAAGGCCGGTCTCGGTTGGGTTGGTAAGCACTCACTTGTTTTAAATCGTGATGCCGGCTCCTGGTTTTTTCTCGGAGAACTTCTGATTAACCTGCCTCTGCCTGTTGATCAACCGGTTGAAGAGCAGTGCGGACGCTGTGTGGCCTGTATGACCACCTGCCCGACACAGGCAATTGTGGCGCCTTATACTATTGATGCCCGCCGCTGCATCTCTTATCTGACTATCGAGCTGGAAGGTGCGATCCCTGAAGAATTCCGCCCGCTGATGGGTAACCGGATCTACGGCTGCGACGACTGCCAGCTTATCTGTCCGTGGAACCGTTTTTCACAGCTGACTGATGAAGATGATTTTTCACCGCGTAAACAACTGCATACACCTGAGTTACTGACACTTTTTGCATGGGATGAAGCCACCTTTCTGCGCATCACGGAAGGCTCCGCGATACGGCGTATCGGGTATCTGCGCTGGCTGAGAAATATCAGTGTTGCACTCGGCAATGCGCCTTATGAAGATAATATTGTAATTGCCCTGACAGAGAAAAAAGGGCTGGCAGACTGGCTGGATGAGCATATTGACTGGGCGGTTGCCTGTCAGTATGTGAAAAGAGATGAATCCGGTATTGAAATACAGACTTCACAGCAAAAACGACTTATTCGTGCTATTTCCAAAGGTTTACCCCGCGACGCCTGAGCCTTCCCCCTATAGCAGAAAAAGTTATCCACAATGCTATGAGTTGTGAA