Homologs in group_1360

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08430 FBDBKF_08430 100.0 Morganella morganii S1 queG tRNA epoxyqueuosine(34) reductase QueG
EHELCC_13095 EHELCC_13095 100.0 Morganella morganii S2 queG tRNA epoxyqueuosine(34) reductase QueG
NLDBIP_13435 NLDBIP_13435 100.0 Morganella morganii S4 queG tRNA epoxyqueuosine(34) reductase QueG
HKOGLL_11910 HKOGLL_11910 100.0 Morganella morganii S5 queG tRNA epoxyqueuosine(34) reductase QueG
F4V73_RS09650 F4V73_RS09650 91.9 Morganella psychrotolerans queG tRNA epoxyqueuosine(34) reductase QueG
PMI_RS16725 PMI_RS16725 77.1 Proteus mirabilis HI4320 queG tRNA epoxyqueuosine(34) reductase QueG

Distribution of the homologs in the orthogroup group_1360

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1360

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CKM4 0.0 627 74 2 410 3 queG Epoxyqueuosine reductase Yersinia pestis
P39288 0.0 601 74 1 385 3 queG Epoxyqueuosine reductase Escherichia coli (strain K12)
Q328E3 0.0 600 74 1 385 3 queG Epoxyqueuosine reductase Shigella dysenteriae serotype 1 (strain Sd197)
Q8ZKA8 0.0 598 74 1 385 3 queG Epoxyqueuosine reductase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8EAN7 0.0 523 67 5 385 3 queG Epoxyqueuosine reductase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q9KV16 0.0 519 65 2 380 3 queG Epoxyqueuosine reductase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5E2C3 0.0 513 62 2 380 3 queG Epoxyqueuosine reductase Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q9HUL4 1.55e-153 440 59 3 352 3 queG Epoxyqueuosine reductase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8P8E0 6.82e-136 395 55 3 352 3 queG Epoxyqueuosine reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q63WN0 4.27e-128 377 55 3 342 3 queG Epoxyqueuosine reductase Burkholderia pseudomallei (strain K96243)
F4G4E2 3.68e-127 373 58 4 321 3 queG Epoxyqueuosine reductase Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
F4BEN2 6.91e-101 306 45 6 346 3 queG Epoxyqueuosine reductase Francisella cf. novicida (strain Fx1)
F7ZDR3 1.14e-81 256 46 3 305 3 queG Epoxyqueuosine reductase Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149)
E4RUV9 2.81e-81 254 42 6 317 3 queG Epoxyqueuosine reductase Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15)
E6X4P3 2.49e-79 249 42 8 325 3 queG Epoxyqueuosine reductase Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)
A6H1G2 3.01e-76 241 41 8 312 3 queG Epoxyqueuosine reductase Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86)
G0J2F8 6.12e-76 240 41 7 319 3 queG Epoxyqueuosine reductase Cyclobacterium marinum (strain ATCC 25205 / DSM 745 / LMG 13164 / NCIMB 1802)
Q8DLA9 4.12e-75 238 41 6 323 3 queG Epoxyqueuosine reductase Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
Q7NKL3 2.28e-66 216 41 7 321 3 queG Epoxyqueuosine reductase Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
P73526 2.74e-64 209 40 7 303 3 queG Epoxyqueuosine reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q3ANP3 5.9e-64 210 37 6 317 3 queG Epoxyqueuosine reductase Synechococcus sp. (strain CC9605)
D3ENT3 2.83e-62 205 35 7 317 3 queG Epoxyqueuosine reductase Atelocyanobacterium thalassa (isolate ALOHA)
Q46I55 1.58e-58 196 34 6 313 3 queG Epoxyqueuosine reductase Prochlorococcus marinus (strain NATL2A)
A5GPV1 1.85e-57 193 35 7 314 3 queG Epoxyqueuosine reductase Synechococcus sp. (strain RCC307)
F9VEN7 2.17e-49 173 33 5 318 3 queG Epoxyqueuosine reductase Lactococcus garvieae (strain Lg2)
Q81I72 1.42e-47 169 31 6 292 3 queG Epoxyqueuosine reductase Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81YT7 1.16e-46 166 31 6 292 3 queG Epoxyqueuosine reductase Bacillus anthracis
Q2FX88 6.9e-45 162 28 8 379 3 queG Epoxyqueuosine reductase Staphylococcus aureus (strain NCTC 8325 / PS 47)
P97030 1.06e-44 161 28 4 291 1 queG Epoxyqueuosine reductase Bacillus subtilis (strain 168)
Q834R1 5.57e-42 154 30 5 314 3 queG Epoxyqueuosine reductase Enterococcus faecalis (strain ATCC 700802 / V583)
Q8Y8H0 7.93e-37 140 28 7 295 3 queG Epoxyqueuosine reductase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P32815 4.15e-29 115 39 1 123 4 None Uncharacterized protein in gldA 3'region (Fragment) Geobacillus stearothermophilus
Q848J2 4.51e-05 49 27 5 136 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense
Q8GJ27 0.000121 47 26 5 139 1 pceA Tetrachloroethene reductive dehalogenase Dehalobacter restrictus (strain DSM 9455 / PER-K23)
Q8L172 0.00013 47 25 4 136 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense (strain Y51)
Q8GJ31 0.000131 47 25 4 136 1 pceA Tetrachloroethene reductive dehalogenase Desulfitobacterium hafniense

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_13120
Feature type CDS
Gene queG
Product tRNA epoxyqueuosine(34) reductase QueG
Location 64144 - 65301 (strand: -1)
Length 1158 (nucleotides) / 385 (amino acids)

Contig

Accession ZDB_370
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1360
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF08331 Epoxyqueuosine reductase QueG, DUF1730
PF13484 4Fe-4S double cluster binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1600 Translation, ribosomal structure and biogenesis (J) J Epoxyqueuosine reductase QueG (queuosine biosynthesis)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18979 epoxyqueuosine reductase [EC:1.17.99.6] - -

Protein Sequence

MNTHPDLHQLAARIKQWGRELGFQQVGICDTDLSAEEPKLQAWLDAGYQGEMDWMARHGMMRARPHELLPGTLRVISVRMNYLPAKASFAAVLQNPEQGYISRYALGRDYHKLLRQRLKQLGERIQAECDELALGNTLSYRPFVDSAPVLERPLAAKAGLGWVGKHSLILNREAGSWFFLGELLINLPLPVDIPVEEQCGRCVACMTTCPTQAIVAPYTVDARRCISYLTIELEGAIPEEFRPLMGNRIYGCDDCQLICPWNRFSQLTDEADFSPRKRLHTPELLDLFAWDEATFLRVTEGSAIRRIGYLRWLRNISVALGNAPYEDKIIIALTEKTGLADWLDEHIRWAVARQYAKRDESRIEIQTSQQKRLIRAISKGLPRDA

Flanking regions ( +/- flanking 50bp)

AACTCCGCACCATTCACCATCACACCTGCAATGTAAGTAAACACTCACCAATGAACACTCACCCTGATTTACACCAGCTCGCCGCCCGGATCAAACAATGGGGACGCGAACTCGGCTTTCAGCAGGTCGGTATCTGCGATACAGATCTCAGCGCGGAAGAGCCGAAGTTACAGGCGTGGCTGGATGCAGGCTATCAGGGAGAGATGGACTGGATGGCACGCCACGGCATGATGCGCGCGCGCCCGCATGAACTGCTGCCGGGCACGCTGCGGGTGATCAGTGTGCGGATGAACTACCTGCCCGCCAAAGCGTCCTTTGCTGCCGTACTGCAAAACCCGGAGCAGGGTTATATCAGCCGTTATGCGCTGGGGCGTGATTATCACAAGCTTCTGCGCCAGCGCCTGAAGCAGCTGGGAGAGCGGATTCAGGCTGAGTGTGATGAACTGGCTCTGGGAAATACCCTCAGCTACCGCCCGTTTGTTGACTCAGCACCGGTACTGGAACGCCCACTGGCAGCCAAAGCGGGCCTTGGTTGGGTTGGTAAGCATTCACTTATTTTAAACCGTGAAGCAGGCTCCTGGTTTTTCCTCGGCGAGCTGCTGATCAACCTGCCGCTGCCGGTTGATATCCCGGTTGAAGAACAGTGCGGCCGCTGTGTCGCCTGCATGACCACCTGCCCGACTCAGGCGATTGTCGCGCCTTATACTGTCGATGCACGCCGCTGTATCTCCTACCTCACTATTGAGCTGGAGGGCGCCATCCCCGAAGAATTCCGCCCGCTGATGGGAAACCGCATTTACGGCTGTGATGACTGCCAGCTTATCTGCCCGTGGAACCGTTTTTCACAACTGACAGACGAGGCGGATTTCTCGCCGCGCAAGCGCCTGCACACGCCGGAACTGCTGGATTTATTCGCCTGGGATGAAGCCACCTTCCTGCGGGTGACAGAGGGCTCGGCTATCCGGCGCATCGGATATCTGCGCTGGCTGAGAAATATCAGTGTCGCTCTCGGCAATGCACCGTATGAAGATAAAATTATTATTGCGCTGACAGAAAAAACCGGACTGGCAGACTGGCTTGATGAGCATATCCGCTGGGCAGTTGCCCGTCAGTATGCCAAAAGAGATGAATCACGTATCGAAATACAGACTTCACAGCAAAAACGTCTTATCCGCGCCATTTCCAAAGGTTTGCCGCGCGACGCCTGATCCCGCCTCATAATCCCGTTAAGTTATCCACAATATTCAGTGTTGTGAAT