Homologs in group_380

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14590 FBDBKF_14590 28.2 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_15395 EHELCC_15395 28.2 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_15925 NLDBIP_15925 28.2 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_15915 LHKJJB_15915 28.2 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_15035 HKOGLL_15035 28.2 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS07385 F4V73_RS07385 26.9 Morganella psychrotolerans - fimbrial protein
PMI_RS05760 PMI_RS05760 23.8 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_380

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_380

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P21648 2.36e-08 58 26 4 152 1 mrkD Fimbria adhesin protein Klebsiella pneumoniae
P13429 3.68e-06 50 30 6 147 1 sfaG S-fimbrial protein subunit SfaG Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q00879 0.000147 47 24 4 141 3 fhaE Protein FhaE Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16655
Feature type CDS
Gene -
Product fimbrial protein
Location 3670975 - 3671994 (strand: -1)
Length 1020 (nucleotides) / 339 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_380
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07345 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Protein Sequence

MNKYITLGCLSALLYTSTAFAEYRADTTTRTVSYNNPIYVSRTAPILTELATIDLGTMYGWTWWNITGPVQAGIYLPGYISASSPKVGSAYVRELGTSGIGYTLHGTITVGCTGSAYVDGLYNVDGNYSNRLICTSNLNRSSYTASLKMTLYKLRNNIKSQTIPSTWVAMLILYHNGGFITSDNTGRTEPKVYLNPLNIVSSGCEVINNNINVPLGSVAKSSFNGVGSVSPDSLQDVNIDLDCDPVSPIKIKFDGTPDASQTAGTISLNNANDSNTAKGYGIQVKYQNQPIELGKLITVSEKNNSGNFSIPLEAGYIQTSETTTAGKADGTLQFTLQYH

Flanking regions ( +/- flanking 50bp)

CGCTCGAGAAAATTCAATTTTTACAACTGGACTGCAGATAGGTGATAAATATGAATAAATATATAACTTTGGGTTGTCTGTCTGCACTTTTGTATACATCAACCGCTTTTGCTGAATATCGTGCCGATACAACCACTAGAACGGTGAGTTATAACAATCCAATTTATGTTTCAAGAACCGCGCCTATTTTAACAGAGCTGGCAACGATTGACTTAGGCACTATGTATGGCTGGACTTGGTGGAATATCACAGGCCCAGTACAGGCGGGGATCTACTTGCCCGGCTATATTTCAGCTTCCAGCCCTAAAGTAGGCAGTGCCTATGTGCGTGAATTAGGGACTAGTGGTATCGGTTATACCCTACACGGGACTATTACTGTCGGTTGCACCGGTTCTGCTTATGTCGATGGACTATATAATGTTGATGGCAACTACAGTAATCGCCTTATTTGCACAAGTAACTTAAACCGTAGTAGTTATACCGCTTCTTTAAAAATGACGTTATATAAACTGCGTAACAATATCAAATCACAAACCATTCCAAGCACATGGGTTGCTATGCTGATTTTGTATCACAATGGGGGATTTATCACCAGTGACAATACTGGCCGTACTGAACCAAAGGTTTACCTTAATCCCCTTAATATTGTTTCCAGTGGCTGTGAAGTTATCAATAATAATATTAATGTTCCTTTAGGCTCTGTGGCAAAATCGAGCTTTAATGGTGTTGGCTCTGTTAGCCCTGATAGTCTACAAGATGTGAATATCGATTTAGATTGTGATCCCGTTTCCCCCATTAAGATAAAATTCGATGGCACCCCTGATGCTAGCCAAACCGCCGGCACGATTAGCCTTAATAATGCTAATGATAGCAATACAGCCAAAGGCTATGGCATTCAGGTGAAATACCAAAACCAACCCATTGAGTTAGGAAAATTGATAACGGTGAGCGAAAAGAATAACAGTGGTAATTTTTCTATTCCTTTAGAAGCGGGTTATATACAAACTTCTGAGACTACCACCGCAGGCAAAGCTGATGGAACACTGCAATTTACCCTGCAATATCATTAAGTAAATTGCGCTCTTAAACTAAAAGGCGGAAGTATTATCCGCCTTTTAAT