Homologs in group_1982

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14590 FBDBKF_14590 38.0 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_15395 EHELCC_15395 38.0 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_15925 NLDBIP_15925 38.0 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_15915 LHKJJB_15915 38.0 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_15035 HKOGLL_15035 38.0 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
PMI_RS16655 PMI_RS16655 26.9 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_1982

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1982

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07385
Feature type CDS
Gene -
Product fimbrial protein
Location 1541282 - 1542304 (strand: -1)
Length 1023 (nucleotides) / 340 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1982
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07345 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Protein Sequence

MIKDIIYGGRIGIVCVMLSIIPVYVNAACTTPEPEIMLTPDMHFAEISEQLPLMAPIAGPFYSRISAGYHCHFTEETSVSFGIAAFGEKIGTTPEGHSVFYFSEGIGYSLGGEISSPGCPAEMHYIDGSDSGGTDIDKIICRDRRVKSDISYRGRVAVTLYKTGVISGNKIPEAQVAKFTLMKNNRWYSTIREPYVTFSGFNIRQRACDISAPREIDLGRVSRTDFSRKGSVAQGSVREFSIGLQCSQLNGAEIRLKRTLSYMGNVPGVLKLEQTKNGAKGIGIQLTRQGTPVKFDEWIPFDNVTARSAQIRFQAALVQIRKNIHPGKAEAVLDYTIRYL

Flanking regions ( +/- flanking 50bp)

AAACCAGTGGCTTGTCACAATGACATTACTGTGTCAGTGAGGATTATTGAATGATTAAAGATATTATATATGGTGGCAGAATAGGTATTGTTTGTGTGATGCTGAGTATCATCCCCGTATATGTAAACGCCGCCTGTACCACGCCGGAGCCTGAAATAATGCTGACCCCGGATATGCATTTTGCTGAAATAAGTGAGCAATTACCGTTAATGGCTCCGATAGCCGGACCATTTTACTCTCGTATTTCAGCAGGATATCACTGTCATTTCACTGAAGAGACTTCAGTATCATTCGGAATTGCCGCATTTGGTGAAAAAATCGGAACCACACCGGAAGGACATTCTGTTTTCTATTTTTCCGAAGGTATCGGCTATAGTTTAGGCGGTGAAATTAGCTCCCCGGGTTGTCCGGCAGAAATGCATTATATTGACGGGAGTGATAGCGGGGGAACGGATATAGATAAAATTATCTGCCGTGACCGTCGTGTAAAAAGCGATATTAGTTACCGGGGACGGGTGGCGGTGACACTGTATAAAACAGGTGTTATATCAGGTAATAAAATACCGGAAGCTCAGGTGGCAAAATTTACGCTGATGAAAAATAACCGGTGGTATTCCACTATCAGAGAACCCTATGTCACTTTTTCCGGTTTTAATATCCGTCAGCGGGCTTGTGATATTTCAGCCCCACGTGAGATTGATTTGGGTCGGGTGTCGCGGACGGATTTCAGCAGAAAAGGATCTGTTGCGCAGGGAAGTGTGCGGGAATTCAGCATCGGATTGCAGTGCAGCCAATTGAACGGAGCTGAAATCCGGCTAAAAAGAACACTTTCTTATATGGGAAATGTGCCCGGAGTACTGAAACTTGAGCAGACTAAAAATGGTGCAAAAGGTATTGGTATTCAGCTAACCCGGCAGGGAACGCCGGTGAAATTTGATGAGTGGATACCTTTTGACAATGTGACTGCGCGGAGTGCACAAATTCGTTTTCAGGCGGCGCTGGTACAGATAAGAAAGAACATTCATCCCGGTAAGGCGGAAGCGGTACTTGATTATACTATCCGCTATCTGTAATAAACAACGCCACGATGTCGTGGCGTTGTTTATACTAACTATATGATAAC