Homologs in group_23

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18 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20020 FBDBKF_20020 17.9 Morganella morganii S1 - Molecular chaperone
FBDBKF_20060 FBDBKF_20060 17.7 Morganella morganii S1 - Fimbria/pilus periplasmic chaperone
EHELCC_03470 EHELCC_03470 17.7 Morganella morganii S2 - Fimbria/pilus periplasmic chaperone
EHELCC_03510 EHELCC_03510 17.9 Morganella morganii S2 - Molecular chaperone
NLDBIP_03470 NLDBIP_03470 17.7 Morganella morganii S4 - Fimbria/pilus periplasmic chaperone
NLDBIP_03510 NLDBIP_03510 17.9 Morganella morganii S4 - Molecular chaperone
LHKJJB_09300 LHKJJB_09300 17.7 Morganella morganii S3 - Fimbria/pilus periplasmic chaperone
LHKJJB_09340 LHKJJB_09340 17.9 Morganella morganii S3 - Molecular chaperone
HKOGLL_09635 HKOGLL_09635 17.9 Morganella morganii S5 - Molecular chaperone
HKOGLL_09675 HKOGLL_09675 17.7 Morganella morganii S5 - Fimbria/pilus periplasmic chaperone
PMI_RS05730 PMI_RS05730 20.3 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS05770 PMI_RS05770 20.7 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS07100 PMI_RS07100 18.9 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone
PMI_RS10905 PMI_RS10905 23.2 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS12535 PMI_RS12535 19.5 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS12550 PMI_RS12550 19.9 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS13450 PMI_RS13450 20.4 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone
PMI_RS17125 PMI_RS17125 21.5 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of the homologs in the orthogroup group_23

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_23

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P28722 4.88e-26 103 28 4 216 3 yhcA Uncharacterized fimbrial chaperone YhcA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15275
Feature type CDS
Gene -
Product fimbria/pilus chaperone family protein
Location 3389033 - 3389707 (strand: -1)
Length 675 (nucleotides) / 224 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_23
Orthogroup size 19
N. genomes 6

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Protein Sequence

MKILKGMIFLILLISHFSHASFQLETMTVILDSEEPRKIFNVKNTGSEPILLSTKVSDLDKQHEIAKNIIITPPITRIEPDQSQNINFILKDGIEFDDEQILKASFQGIGVAKVNSTKMPIRQDIAMLIIPKGLTIEREPWKNLEVKQVNNQLILKNNGKQVIRMAPAFSSLPSNNGYSIGQFYIRPQEEIKVDVKEKLTEIQISPLSRYGFKLAGDIKMKVNN

Flanking regions ( +/- flanking 50bp)

ATGAAAAAGTTGATGCAATTTGTAAGTAATACAAAGAGGATAGTCTAATTATGAAAATACTAAAAGGAATGATTTTTCTCATTCTATTAATAAGTCATTTTTCTCATGCTAGTTTTCAATTGGAAACCATGACTGTTATTTTAGATTCAGAAGAGCCAAGAAAGATTTTTAATGTTAAAAATACGGGTAGTGAACCTATTTTATTATCAACAAAAGTCAGCGATTTAGATAAACAACACGAAATAGCAAAAAATATTATTATAACTCCACCTATTACAAGAATAGAGCCAGATCAAAGTCAGAATATTAATTTTATTTTAAAAGACGGTATTGAATTTGATGATGAACAAATTTTAAAAGCCTCTTTCCAAGGTATTGGTGTTGCAAAGGTCAATTCAACAAAAATGCCTATCAGACAAGATATTGCGATGTTAATTATTCCAAAAGGGTTAACCATAGAGCGTGAACCTTGGAAAAATCTAGAAGTAAAACAAGTCAATAATCAATTAATATTAAAGAATAATGGTAAACAAGTTATTCGTATGGCTCCCGCTTTTAGCTCTTTACCAAGCAATAACGGTTATAGTATTGGTCAATTTTATATTCGTCCTCAAGAAGAAATTAAAGTTGATGTAAAAGAAAAGTTAACAGAAATACAAATATCACCTTTAAGTCGTTATGGATTTAAATTAGCAGGTGATATTAAAATGAAAGTTAATAATTAAAATAATTAATATATAAAGCCTTGATATGTTATATCAAGGCTTTTTTATTT