Homologs in group_3894

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS09540 PMI_RS09540 74.1 Proteus mirabilis HI4320 - (Fe-S)-binding protein

Distribution of the homologs in the orthogroup group_3894

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3894

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77252 6.26e-140 395 78 0 238 3 ykgE Uncharacterized protein YkgE Escherichia coli (strain K12)
B7GLD6 3.52e-93 276 53 1 236 3 lutA Lactate utilization protein A Anoxybacillus flavithermus (strain DSM 21510 / WK1)
C5D587 8.94e-92 273 52 1 239 3 lutA Lactate utilization protein A Geobacillus sp. (strain WCH70)
Q5L300 2.88e-91 271 52 1 236 3 lutA Lactate utilization protein A Geobacillus kaustophilus (strain HTA426)
Q62Q36 4.14e-90 268 52 1 239 3 lutA Lactate utilization protein A Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
A4IK96 6.14e-90 268 52 1 236 3 lutA Lactate utilization protein A Geobacillus thermodenitrificans (strain NG80-2)
A7GMJ2 2.78e-87 261 52 1 238 3 lutA Lactate utilization protein A Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
A7Z902 5.6e-86 258 51 1 239 3 lutA Lactate utilization protein A Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
B7IMD3 2.27e-85 256 51 1 238 3 lutA Lactate utilization protein A Bacillus cereus (strain G9842)
Q81GA5 3.08e-85 256 51 1 238 3 lutA Lactate utilization protein A Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HH58 3.08e-85 256 51 1 238 3 lutA Lactate utilization protein A Bacillus cereus (strain B4264)
A8FDN4 3.58e-85 256 50 1 238 3 lutA Lactate utilization protein A Bacillus pumilus (strain SAFR-032)
B7JF00 1.12e-84 255 51 1 238 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain AH820)
A9VKN0 1.84e-84 254 51 1 239 3 lutA2 Lactate utilization protein A 2 Bacillus mycoides (strain KBAB4)
O07020 2.98e-84 254 50 1 238 1 lutA Lactate utilization protein A Bacillus subtilis (strain 168)
Q6HLP2 9.17e-84 252 50 1 238 3 lutA Lactate utilization protein A Bacillus thuringiensis subsp. konkukian (strain 97-27)
B7I0K9 9.17e-84 252 50 1 238 3 lutA Lactate utilization protein A Bacillus cereus (strain AH187)
Q73BK2 9.17e-84 252 50 1 238 3 lutA Lactate utilization protein A Bacillus cereus (strain ATCC 10987 / NRS 248)
A0RBC7 9.17e-84 252 50 1 238 3 lutA Lactate utilization protein A Bacillus thuringiensis (strain Al Hakam)
C3LAQ4 9.17e-84 252 50 1 238 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis (strain CDC 684 / NRRL 3495)
Q63E67 9.17e-84 252 50 1 238 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain ZK / E33L)
B9IUP3 9.17e-84 252 50 1 238 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain Q1)
C1EM10 9.17e-84 252 50 1 238 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain 03BB102)
Q81TG2 9.17e-84 252 50 1 238 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis
C3P4C3 9.17e-84 252 50 1 238 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis (strain A0248)
Q9KBU2 1.44e-81 247 47 1 240 3 lutA Lactate utilization protein A Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q5WJE1 1.73e-81 246 49 1 240 3 lutA Lactate utilization protein A Shouchella clausii (strain KSM-K16)
Q8ET92 2.7e-80 244 44 1 241 3 lutA Lactate utilization protein A Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
B1HVX6 1.72e-77 236 50 1 225 3 lutA Lactate utilization protein A Lysinibacillus sphaericus (strain C3-41)
C4L0S2 1.1e-76 234 48 1 236 3 lutA Lactate utilization protein A Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
A9VI76 1.22e-75 232 45 2 243 3 lutA1 Lactate utilization protein A 1 Bacillus mycoides (strain KBAB4)
B9E9G8 1.13e-72 224 45 1 241 3 lutA Lactate utilization protein A Macrococcus caseolyticus (strain JCSC5402)
Q81ND5 4.98e-70 218 44 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis
C3P1X2 4.98e-70 218 44 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis (strain A0248)
C3LCL5 4.98e-70 218 44 2 237 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis (strain CDC 684 / NRRL 3495)
Q638X2 7.21e-70 217 44 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain ZK / E33L)
B7JF51 7.61e-70 217 44 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain AH820)
C1EKT5 2.21e-69 216 44 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain 03BB102)
B9IRL0 4.71e-68 213 43 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain Q1)
P94534 2.29e-23 100 26 3 239 3 glcF Probable glycolate oxidase iron-sulfur subunit Bacillus subtilis (strain 168)
P0A996 9.59e-15 76 29 6 189 1 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Escherichia coli (strain K12)
P0A997 9.59e-15 76 29 6 189 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Escherichia coli O157:H7
D9PUX5 3.78e-12 68 26 3 235 1 tfrB Fumarate reductase (CoM/CoB) subunit B Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
Q8TSV7 1.16e-10 64 21 5 222 3 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q6LYC4 3.35e-10 63 23 5 223 3 MMP1067 Uncharacterized iron-sulfur protein MMP1067 Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
P96797 2.1e-09 60 20 5 222 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina barkeri (strain Fusaro / DSM 804)
P52074 2.55e-08 57 19 3 208 1 glcF Glycolate oxidase iron-sulfur subunit Escherichia coli (strain K12)
Q57557 3.38e-08 57 22 7 243 3 MJ0092 Uncharacterized iron-sulfur protein MJ0092 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8PVW3 8.15e-08 55 20 6 223 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
A0A0E3NEE1 1.19e-07 55 19 5 222 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina thermophila (strain ATCC 43570 / DSM 1825 / OCM 12 / VKM B-1830 / TM-1)
P43801 8.31e-07 52 23 7 225 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q58153 5.07e-05 47 21 11 269 3 hdrB1 CoB--CoM heterodisulfide reductase subunit B 1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15065
Feature type CDS
Gene -
Product (Fe-S)-binding protein
Location 3342466 - 3343203 (strand: -1)
Length 738 (nucleotides) / 245 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3894
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF02754 Cysteine-rich domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0247 Energy production and conversion (C) C Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18928 L-lactate dehydrogenase complex protein LldE - -

Protein Sequence

MDVNFYVTCIGDALKSQMARDSVLLLEKLGCRVHFLEKQGCCGQPAINSGYIKDAIPAMKNLIKTFEVNDYPIISPAGSCSFAIKSYAKYLVNEPDWAIRAEKIANRMFDLTSFIVNQLNIVDVGASLKGKAVYHPSCSLFRKMGVKEEPLTLLRHVKGLELLPFDNMETCCGFGGTFSVKMAEISGEMVKEKVHHIMDAHPDYLIGADVSCLLNIGGRLEREGRPVKVMHIAQVLMSNEEELCH

Flanking regions ( +/- flanking 50bp)

CTCGGCTTATTTACTTACTCTACATAGATAAAAGCAATGGGAGCATAAGTATGGATGTTAATTTTTATGTAACATGCATTGGTGACGCTTTAAAGTCTCAGATGGCAAGAGATAGCGTATTGCTGTTAGAAAAACTAGGCTGTCGAGTTCATTTTCTCGAAAAACAGGGCTGTTGTGGTCAACCTGCTATTAATAGTGGATATATTAAAGATGCCATTCCAGCGATGAAAAACTTGATTAAAACCTTTGAAGTTAATGACTATCCTATTATTTCTCCTGCTGGATCATGTTCTTTTGCTATTAAAAGTTATGCTAAATATCTGGTAAATGAACCTGACTGGGCTATTCGTGCAGAAAAAATAGCTAATCGCATGTTTGATCTCACCTCCTTTATCGTTAATCAATTAAATATTGTTGATGTAGGTGCAAGTCTTAAAGGAAAAGCTGTTTATCACCCGTCTTGTAGCTTATTTCGTAAAATGGGAGTGAAAGAAGAGCCACTCACATTATTACGTCATGTAAAAGGGCTAGAATTATTACCTTTTGACAATATGGAAACCTGTTGTGGTTTTGGGGGGACGTTTTCGGTAAAAATGGCTGAAATTTCAGGTGAAATGGTCAAAGAAAAAGTTCACCACATTATGGATGCTCATCCTGACTATTTAATTGGTGCGGATGTCAGTTGCTTATTAAATATAGGTGGTCGTTTAGAGAGAGAAGGTCGTCCAGTTAAAGTGATGCATATTGCGCAAGTATTGATGAGCAATGAGGAGGAATTATGTCATTAAAAACAAGCTCTCTTCCTTTTAAAACGCTAATTGATCGTCAAGTTCACGAT