COG0247


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0247, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0247 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_775 FBDBKF_03585 120979 122175 -1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Morganella morganii S1
1 group_775 EHELCC_06950 124928 126124 1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Morganella morganii S2
2 group_775 NLDBIP_07275 124801 125997 1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Morganella morganii S4
3 group_775 LHKJJB_06810 88547 89743 1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Morganella morganii S3
4 group_775 HKOGLL_04120 143644 144840 -1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Morganella morganii S5
5 group_775 F4V73_RS11285 398770 399966 1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Morganella psychrotolerans
6 group_3894 PMI_RS09540 2082917 2083636 1 (Fe-S)-binding protein Proteus mirabilis HI4320
7 group_3894 PMI_RS15065 3342466 3343203 -1 (Fe-S)-binding protein Proteus mirabilis HI4320
8 group_775 PMI_RS17880 3928407 3929600 1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC Proteus mirabilis HI4320