Homologs in group_3894

Help

1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS15065 PMI_RS15065 74.1 Proteus mirabilis HI4320 - (Fe-S)-binding protein

Distribution of the homologs in the orthogroup group_3894

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3894

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77252 1.56e-130 370 72 0 239 3 ykgE Uncharacterized protein YkgE Escherichia coli (strain K12)
C5D587 1.83e-93 277 53 1 239 3 lutA Lactate utilization protein A Geobacillus sp. (strain WCH70)
Q62Q36 1.98e-93 276 54 1 239 3 lutA Lactate utilization protein A Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
B7GLD6 1.89e-90 269 54 1 236 3 lutA Lactate utilization protein A Anoxybacillus flavithermus (strain DSM 21510 / WK1)
O07020 8.28e-90 268 53 1 239 1 lutA Lactate utilization protein A Bacillus subtilis (strain 168)
A7Z902 5.14e-88 263 53 1 239 3 lutA Lactate utilization protein A Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
A4IK96 5.55e-88 263 52 1 236 3 lutA Lactate utilization protein A Geobacillus thermodenitrificans (strain NG80-2)
Q5L300 1.41e-86 259 51 1 239 3 lutA Lactate utilization protein A Geobacillus kaustophilus (strain HTA426)
A7GMJ2 5.46e-86 258 52 1 239 3 lutA Lactate utilization protein A Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
B7IMD3 6.94e-86 258 52 1 239 3 lutA Lactate utilization protein A Bacillus cereus (strain G9842)
Q81GA5 2.02e-85 256 52 1 239 3 lutA Lactate utilization protein A Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HH58 2.02e-85 256 52 1 239 3 lutA Lactate utilization protein A Bacillus cereus (strain B4264)
B7JF00 2.66e-85 256 52 1 239 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain AH820)
Q6HLP2 3.65e-85 256 52 1 239 3 lutA Lactate utilization protein A Bacillus thuringiensis subsp. konkukian (strain 97-27)
B7I0K9 3.65e-85 256 52 1 239 3 lutA Lactate utilization protein A Bacillus cereus (strain AH187)
Q73BK2 3.65e-85 256 52 1 239 3 lutA Lactate utilization protein A Bacillus cereus (strain ATCC 10987 / NRS 248)
A0RBC7 3.65e-85 256 52 1 239 3 lutA Lactate utilization protein A Bacillus thuringiensis (strain Al Hakam)
C3LAQ4 3.65e-85 256 52 1 239 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis (strain CDC 684 / NRRL 3495)
Q63E67 3.65e-85 256 52 1 239 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain ZK / E33L)
B9IUP3 3.65e-85 256 52 1 239 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain Q1)
C1EM10 3.65e-85 256 52 1 239 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain 03BB102)
Q81TG2 3.65e-85 256 52 1 239 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis
C3P4C3 3.65e-85 256 52 1 239 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis (strain A0248)
A9VKN0 1.51e-84 254 52 1 239 3 lutA2 Lactate utilization protein A 2 Bacillus mycoides (strain KBAB4)
Q9KBU2 5.47e-84 253 50 1 239 3 lutA Lactate utilization protein A Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
A8FDN4 5.91e-81 245 48 1 239 3 lutA Lactate utilization protein A Bacillus pumilus (strain SAFR-032)
B9E9G8 7.03e-80 243 49 1 239 3 lutA Lactate utilization protein A Macrococcus caseolyticus (strain JCSC5402)
C4L0S2 2.49e-79 241 50 1 236 3 lutA Lactate utilization protein A Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
Q5WJE1 1.09e-78 239 48 1 239 3 lutA Lactate utilization protein A Shouchella clausii (strain KSM-K16)
Q8ET92 1.19e-78 239 45 1 239 3 lutA Lactate utilization protein A Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
B1HVX6 7.6e-78 237 51 1 225 3 lutA Lactate utilization protein A Lysinibacillus sphaericus (strain C3-41)
A9VI76 3.87e-75 231 47 2 237 3 lutA1 Lactate utilization protein A 1 Bacillus mycoides (strain KBAB4)
Q81ND5 2.13e-72 223 46 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis
C3P1X2 2.13e-72 223 46 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis (strain A0248)
C3LCL5 2.13e-72 223 46 2 237 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis (strain CDC 684 / NRRL 3495)
Q638X2 2.56e-72 223 46 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain ZK / E33L)
B7JF51 3.09e-72 223 46 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain AH820)
C1EKT5 1.05e-71 222 45 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain 03BB102)
B9IRL0 2.29e-71 221 45 2 237 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain Q1)
P94534 8.58e-27 110 27 3 240 3 glcF Probable glycolate oxidase iron-sulfur subunit Bacillus subtilis (strain 168)
P0A996 1.38e-12 69 25 9 245 1 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Escherichia coli (strain K12)
P0A997 1.38e-12 69 25 9 245 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Escherichia coli O157:H7
D9PUX5 4.12e-12 68 26 3 236 1 tfrB Fumarate reductase (CoM/CoB) subunit B Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
Q6LYC4 2.18e-11 66 22 6 243 3 MMP1067 Uncharacterized iron-sulfur protein MMP1067 Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
Q57557 1.18e-09 61 22 5 230 3 MJ0092 Uncharacterized iron-sulfur protein MJ0092 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P52074 1.52e-08 57 21 5 227 1 glcF Glycolate oxidase iron-sulfur subunit Escherichia coli (strain K12)
P96797 1.71e-08 57 23 8 223 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina barkeri (strain Fusaro / DSM 804)
Q8TSV7 2.16e-08 57 24 9 229 3 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
P43801 4.07e-06 50 24 8 225 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A0E3NEE1 2.51e-05 48 21 8 229 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina thermophila (strain ATCC 43570 / DSM 1825 / OCM 12 / VKM B-1830 / TM-1)
Q8PVW3 0.00016 45 23 9 229 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09540
Feature type CDS
Gene -
Product (Fe-S)-binding protein
Location 2082917 - 2083636 (strand: 1)
Length 720 (nucleotides) / 239 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3894
Orthogroup size 2
N. genomes 1

Actions

Genomic region

Domains

PF02754 Cysteine-rich domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0247 Energy production and conversion (C) C Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18928 L-lactate dehydrogenase complex protein LldE - -

Protein Sequence

MKVNFYATCLGDVLKADSARDTVLLLEKLGCEVLFQERQGCCGQPALNSGYVNDAKPAMKSLIETLEVNDYPIISPAGSCTYAIKGYPSYLADEPQWAQRAQGVADRLIDLTSFIVNTLGVVDVGARLAGKAVYHPSCSLTRKLGVVSEPLTLLKHVEGLEMLPFANSETCCGFGGTFSVKMSEISGEMVTEKVKHIMEVSPDYVIGADTSCLINIQGRLSREKRPVKVLHIAQVLMSQ

Flanking regions ( +/- flanking 50bp)

TATCTTAAATAAAAATGACAACATCTGAGCGATGTTTTGGAGTTCGGTGAATGAAAGTTAATTTTTATGCAACCTGTCTTGGTGATGTGCTAAAAGCAGATTCGGCACGAGATACCGTATTATTGCTCGAAAAATTAGGTTGCGAAGTATTATTTCAAGAGCGCCAGGGTTGCTGTGGTCAGCCAGCACTTAATAGCGGTTATGTTAATGATGCAAAACCCGCAATGAAATCATTAATTGAGACATTAGAAGTTAATGATTATCCGATTATTTCCCCTGCAGGCTCATGCACTTATGCGATTAAAGGCTATCCCAGCTATCTTGCCGATGAGCCTCAATGGGCGCAGCGAGCCCAAGGTGTGGCCGATCGTTTAATTGATCTTACCAGCTTTATCGTCAACACCTTAGGTGTGGTTGATGTTGGCGCCCGCCTTGCGGGTAAAGCGGTTTATCATCCCTCTTGTAGTTTAACGCGAAAGTTAGGGGTTGTTAGTGAACCTTTAACCTTATTAAAACATGTTGAAGGACTCGAAATGTTACCTTTCGCCAATTCAGAAACTTGTTGTGGTTTTGGCGGCACCTTCTCAGTAAAAATGTCAGAAATTTCCGGTGAAATGGTCACTGAAAAAGTAAAACATATCATGGAAGTCAGCCCTGATTACGTCATTGGTGCAGATACCAGTTGTTTAATTAATATTCAAGGCCGTTTAAGTCGTGAAAAGCGTCCTGTCAAAGTGCTGCATATTGCACAAGTTTTAATGAGTCAATAAGGGGGCTGCAATGTCTATTAAAACCAGTAATATCGATTTTAGACCACGCT