Homologs in group_2057

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15420 FBDBKF_15420 48.9 Morganella morganii S1 - Chitin-binding protein
EHELCC_15780 EHELCC_15780 48.9 Morganella morganii S2 - Chitin-binding protein
NLDBIP_16590 NLDBIP_16590 48.9 Morganella morganii S4 - Chitin-binding protein
LHKJJB_16215 LHKJJB_16215 48.9 Morganella morganii S3 - Chitin-binding protein
HKOGLL_15985 HKOGLL_15985 48.9 Morganella morganii S5 - Chitin-binding protein
F4V73_RS17725 F4V73_RS17725 44.7 Morganella psychrotolerans - lytic polysaccharide monooxygenase

Distribution of the homologs in the orthogroup group_2057

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2057

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P9WEM3 3.37e-76 230 60 2 173 1 CBP21 AA10 family lytic polysaccharide monooxygenase CBP21 Serratia marcescens
Q8EHY2 5.29e-61 200 49 4 201 3 gbpA GlcNAc-binding protein A Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q8GBD4 1.25e-60 199 48 3 202 3 gbpA GlcNAc-binding protein A Yersinia enterocolitica
A1JQE6 1.25e-60 199 48 3 202 3 gbpA GlcNAc-binding protein A Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q7MEW9 5.97e-59 195 47 4 198 3 gbpA GlcNAc-binding protein A Vibrio vulnificus (strain YJ016)
Q8D7V4 6.3e-59 195 47 4 198 3 gbpA GlcNAc-binding protein A Vibrio vulnificus (strain CMCP6)
Q6LKG5 1.03e-56 189 46 4 210 3 gbpA GlcNAc-binding protein A Photobacterium profundum (strain SS9)
B5ESR7 1.28e-56 189 47 5 204 3 gbpA GlcNAc-binding protein A Aliivibrio fischeri (strain MJ11)
Q5E183 1.5e-56 189 47 5 204 3 gbpA GlcNAc-binding protein A Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q87FT0 2.01e-55 186 48 3 195 3 gbpA GlcNAc-binding protein A Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7N3J0 4.05e-53 179 43 4 211 1 gbpA GlcNAc-binding protein A Vibrio campbellii (strain ATCC BAA-1116)
A5F0H4 2.19e-51 175 44 4 210 3 gbpA GlcNAc-binding protein A Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9KLD5 2.36e-51 175 44 4 210 1 gbpA GlcNAc-binding protein A Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
C3LW75 3.8e-51 174 44 4 210 3 gbpA GlcNAc-binding protein A Vibrio cholerae serotype O1 (strain M66-2)
Q838S1 1.79e-45 152 42 5 204 1 EF_0362 Lytic chitin monooxygenase Enterococcus faecalis (strain ATCC 700802 / V583)
A0A0D1CHL0 5.76e-43 149 41 4 174 1 UMAG_05439 AA10 family lytic polysaccharide monooxygenase C Ustilago maydis (strain 521 / FGSC 9021)
A3KIM2 1.71e-20 87 33 6 196 1 SAM23877_0645 Lytic chitin monooxygenase Streptomyces ambofaciens (strain ATCC 23877 / 3486 / DSM 40053 / JCM 4204 / NBRC 12836 / NRRL B-2516)
Q9I589 5.56e-18 84 31 6 186 1 cbpD Chitin-binding protein CbpD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q02I11 5.73e-18 84 31 6 186 1 cpbD Chitin-binding protein CbpD Pseudomonas aeruginosa (strain UCBPP-PA14)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13115
Feature type CDS
Gene -
Product lytic polysaccharide monooxygenase
Location 2911710 - 2912321 (strand: -1)
Length 612 (nucleotides) / 203 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2057
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3397 General function prediction only (R) R Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K21713 lytic chitin monoxygenase [EC:1.14.99.53] - -

Protein Sequence

MKKNKLMLFTATLLLSSAGIISTASAEVTLKHGYIDIPPSRAFLCSSEGENLNKNCGPIQYEPQSIEGDKGFPKGGPADGEIASGGKATFSALNAQSADRWHKVAMKSGENTFKWTLTAKHSTESWRFFITKPGWDVNKPLTRADFDLTPFCQRNDNGKIPTETVTLNCNIPERSGYQIILGVWDIADTGNAFYQVIDAEFKK

Flanking regions ( +/- flanking 50bp)

TGACATAATCATTATATTTTAAAAAATTTAATTATTATTGAGGATTTATTATGAAGAAAAATAAACTTATGCTATTTACTGCAACATTATTATTATCATCTGCAGGTATTATTTCAACAGCATCAGCTGAGGTGACATTAAAGCATGGCTATATTGATATCCCACCCAGCAGAGCTTTTCTTTGTTCATCCGAAGGGGAGAATTTAAATAAAAATTGTGGTCCGATACAGTATGAACCGCAATCCATTGAAGGGGATAAAGGGTTCCCTAAAGGTGGCCCAGCAGATGGTGAAATTGCCAGTGGTGGAAAGGCAACTTTTTCTGCTTTAAATGCACAAAGTGCAGATCGCTGGCATAAAGTGGCAATGAAAAGTGGCGAAAATACTTTTAAGTGGACATTAACTGCAAAACATAGCACTGAATCATGGCGCTTCTTTATTACTAAACCCGGGTGGGATGTTAATAAACCATTGACCCGTGCTGATTTTGATTTAACACCTTTCTGCCAACGAAATGATAATGGGAAAATACCCACAGAAACCGTAACATTAAATTGTAATATACCAGAGCGTTCTGGTTATCAAATTATTTTAGGTGTTTGGGATATTGCTGATACGGGTAATGCTTTTTATCAAGTTATTGATGCTGAATTTAAAAAATAACTCGCTATATTTTATTTAAATAATTATTTTTGTCATACTGTTAATCTTAA