Orthogroup:group_2057


Homologs in group_2057

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15420 FBDBKF_15420 Morganella morganii S1 - Chitin-binding protein
EHELCC_15780 EHELCC_15780 Morganella morganii S2 - Chitin-binding protein
NLDBIP_16590 NLDBIP_16590 Morganella morganii S4 - Chitin-binding protein
LHKJJB_16215 LHKJJB_16215 Morganella morganii S3 - Chitin-binding protein
HKOGLL_15985 HKOGLL_15985 Morganella morganii S5 - Chitin-binding protein
F4V73_RS17725 F4V73_RS17725 Morganella psychrotolerans - lytic polysaccharide monooxygenase
PMI_RS13115 PMI_RS13115 Proteus mirabilis HI4320 - lytic polysaccharide monooxygenase

Distribution of group_2057 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2057 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2057

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2057.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 Chitin-binding protein 5
2 lytic polysaccharide monooxygenase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3397 7 R General function prediction only (R) Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K21713 1 lytic chitin monoxygenase [EC:1.14.99.53] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03067 7 Lytic polysaccharide mono-oxygenase, cellulose-degrading

Annotations of the 19 SwissProt hits

Annotation Number of occurrences
AA10 family lytic polysaccharide monooxygenase C 1
AA10 family lytic polysaccharide monooxygenase CBP21 1
Chitin-binding protein CbpD 2
GlcNAc-binding protein A 13
Lytic chitin monooxygenase 2

Protein length

Min length 191
Max length 203
Mean length (sd) 192.7 (4.5)
Median length 191.0

Protein length distribution