Homologs in group_1054

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05970 FBDBKF_05970 79.4 Morganella morganii S1 bamA outer membrane protein assembly factor BamA
EHELCC_09015 EHELCC_09015 79.4 Morganella morganii S2 bamA outer membrane protein assembly factor BamA
NLDBIP_09395 NLDBIP_09395 79.4 Morganella morganii S4 bamA outer membrane protein assembly factor BamA
LHKJJB_08360 LHKJJB_08360 79.4 Morganella morganii S3 bamA outer membrane protein assembly factor BamA
HKOGLL_07910 HKOGLL_07910 79.4 Morganella morganii S5 bamA outer membrane protein assembly factor BamA
F4V73_RS15925 F4V73_RS15925 80.4 Morganella psychrotolerans bamA outer membrane protein assembly factor BamA

Distribution of the homologs in the orthogroup group_1054

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1054

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9S341 0.0 1323 78 2 802 3 bamA Outer membrane protein assembly factor BamA Photorhabdus luminescens
Q7N8N9 0.0 1319 78 2 802 3 bamA Outer membrane protein assembly factor BamA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JQG8 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q667J7 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TL83 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis (strain Pestoides F)
Q1CFF5 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R388 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZH58 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis
B2JZ26 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CAM6 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FFH7 0.0 1287 76 2 802 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
C5B7R5 0.0 1268 74 2 802 3 bamA Outer membrane protein assembly factor BamA Edwardsiella ictaluri (strain 93-146)
A8GID8 0.0 1262 74 2 804 3 bamA Outer membrane protein assembly factor BamA Serratia proteamaculans (strain 568)
A7MGT7 0.0 1252 73 2 804 3 bamA Outer membrane protein assembly factor BamA Cronobacter sakazakii (strain ATCC BAA-894)
D5CHY0 0.0 1250 74 3 806 1 bamA Outer membrane protein assembly factor BamA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
B5Y1J4 0.0 1247 73 3 812 3 bamA Outer membrane protein assembly factor BamA Klebsiella pneumoniae (strain 342)
A8ALB1 0.0 1245 73 3 812 3 bamA Outer membrane protein assembly factor BamA Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A6T4X9 0.0 1244 72 3 812 3 bamA Outer membrane protein assembly factor BamA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A4W6S2 0.0 1243 73 2 805 3 bamA Outer membrane protein assembly factor BamA Enterobacter sp. (strain 638)
A1A7M1 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O1:K1 / APEC
Q3Z5I1 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Shigella sonnei (strain Ss046)
P0A943 0.0 1241 72 4 815 2 bamA Outer membrane protein assembly factor BamA Shigella flexneri
Q0T832 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Shigella flexneri serotype 5b (strain 8401)
Q325W3 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Shigella boydii serotype 4 (strain Sb227)
B2U320 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1RG12 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain UTI89 / UPEC)
B1LGX9 0.0 1241 73 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain SMS-3-5 / SECEC)
B6HZF1 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain SE11)
B7N844 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A940 0.0 1241 72 4 815 1 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12)
B1IQG4 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A941 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLF6 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A7ZWC3 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O9:H4 (strain HS)
B1XD46 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12 / DH10B)
C4ZRR9 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M1Y0 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O8 (strain IAI1)
B7MP37 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O81 (strain ED1a)
B7NID9 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5Z0F6 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A942 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O157:H7
B7LGN8 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain 55989 / EAEC)
B7MBF8 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UIM2 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZHR7 0.0 1241 72 4 815 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O139:H28 (strain E24377A / ETEC)
A9MPI4 0.0 1240 72 4 815 3 bamA Outer membrane protein assembly factor BamA Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q32JT2 0.0 1238 72 4 815 3 bamA Outer membrane protein assembly factor BamA Shigella dysenteriae serotype 1 (strain Sd197)
B2VE18 0.0 1238 73 1 803 3 bamA Outer membrane protein assembly factor BamA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
B4TYD7 0.0 1237 72 4 815 3 bamA Outer membrane protein assembly factor BamA Salmonella schwarzengrund (strain CVM19633)
B4SV06 0.0 1237 72 4 815 3 bamA Outer membrane protein assembly factor BamA Salmonella newport (strain SL254)
B5RHG2 0.0 1237 72 4 815 3 bamA Outer membrane protein assembly factor BamA Salmonella gallinarum (strain 287/91 / NCTC 13346)
B7LW74 0.0 1230 72 3 809 3 bamA Outer membrane protein assembly factor BamA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q8ZRP0 0.0 1225 72 4 809 1 bamA Outer membrane protein assembly factor BamA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A9N0S6 0.0 1225 72 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5R3J0 0.0 1225 72 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella enteritidis PT4 (strain P125109)
B5FJ24 0.0 1225 72 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella dublin (strain CT_02021853)
C0Q6K0 0.0 1224 72 3 810 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi C (strain RKS4594)
Q57T31 0.0 1223 72 3 810 3 bamA Outer membrane protein assembly factor BamA Salmonella choleraesuis (strain SC-B67)
B5BAN4 0.0 1222 72 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi A (strain AKU_12601)
Q5PD65 0.0 1222 72 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5F8T8 0.0 1221 72 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella agona (strain SL483)
Q8Z9A3 0.0 1220 71 4 815 3 bamA Outer membrane protein assembly factor BamA Salmonella typhi
B4TK52 0.0 1217 72 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella heidelberg (strain SL476)
C6DAJ1 0.0 1211 71 2 809 3 bamA Outer membrane protein assembly factor BamA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D8D5 0.0 1209 70 3 814 3 bamA Outer membrane protein assembly factor BamA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q2NRL5 0.0 1188 71 1 808 3 bamA Outer membrane protein assembly factor BamA Sodalis glossinidius (strain morsitans)
P46024 0.0 710 45 7 806 1 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae
P44935 0.0 709 45 8 806 1 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O32629 0.0 706 45 8 806 3 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae
Q8K9S5 0.0 620 37 3 806 3 bamA Outer membrane protein assembly factor BamA Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9K1H0 2.41e-153 470 34 12 824 1 bamA Outer membrane protein assembly factor BamA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P57331 4.85e-141 432 37 0 543 3 bamA Outer membrane protein assembly factor BamA Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
C6V5K2 2.37e-44 174 22 17 792 3 bamA Outer membrane protein assembly factor BamA Neorickettsia risticii (strain Illinois)
Q729H8 1.71e-41 166 23 25 812 3 bamA Outer membrane protein assembly factor BamA Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
O25369 1.83e-29 129 24 29 860 3 bamA Outer membrane protein assembly factor BamA Helicobacter pylori (strain ATCC 700392 / 26695)
O83346 2.64e-23 109 24 15 530 1 tp92 Putative outer membrane protein assembly factor TP_0326 Treponema pallidum (strain Nichols)
Q7ZWS5 3.27e-13 76 24 17 477 2 samm50-a Sorting and assembly machinery component 50 homolog A Xenopus laevis
Q6AXV4 4.32e-13 75 23 16 475 1 Samm50 Sorting and assembly machinery component 50 homolog Rattus norvegicus
Q6P806 4.78e-13 75 23 17 476 2 samm50 Sorting and assembly machinery component 50 homolog Xenopus tropicalis
Q8BGH2 4.75e-12 72 23 16 474 1 Samm50 Sorting and assembly machinery component 50 homolog Mus musculus
Q6PA35 5.26e-12 72 23 17 477 2 samm50-b Sorting and assembly machinery component 50 homolog B Xenopus laevis
Q5U3I0 6.52e-12 72 22 17 495 2 samm50b Sorting and assembly machinery component 50 homolog B Danio rerio
Q9Y512 3.79e-11 70 23 17 477 1 SAMM50 Sorting and assembly machinery component 50 homolog Homo sapiens
Q2HJ55 7.25e-11 68 23 17 478 2 SAMM50 Sorting and assembly machinery component 50 homolog Bos taurus
Q803G5 9.02e-11 68 22 17 502 2 samm50a Sorting and assembly machinery component 50 homolog A Danio rerio
Q10478 4.29e-07 57 25 9 264 3 SPAC17C9.06 SAM50-like protein SPAC17C9.06 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P44038 1.71e-06 55 22 20 486 1 tama Translocation and assembly module subunit TamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11245
Feature type CDS
Gene bamA
Product outer membrane protein assembly factor BamA
Location 2474089 - 2476497 (strand: -1)
Length 2409 (nucleotides) / 802 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1054
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain
PF07244 Surface antigen variable number repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4775 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein assembly factor BamA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07277 outer membrane protein insertion porin family Mitophagy - animal -

Protein Sequence

MAMKKLLIASLLLGSATAYGSDGFVVQDIQFEGLQRVAVGAALLNMPVRVGDSVSDDDISRTIRSLFATGNFDDVRVLRDGNVLIVQVKERPTIASITFSGNKAIKEDMLKQNLDASNIRIGETLDRTMLANIEKGLEDFYYSVGKYNATVKVVVTPLPRNRVDLKLVFAEGVSATIQQINIVGNKAFSTAELVNRFQLRDDVPWWNLAADEKYQKQKLAGDLETLRSFYLDRGYARFDIESTNVSLTPDKKGIYITINLKEGDKYTVESTEINGNTAGYTKEIEDLIQIAPGSLYNGAQVTKTENEIKNLLGRYGYAYPRVMTNPEINDENKTVKLHVNVDAGNRFYVRQIRFAGNDITKDSVLRREMRQMEGAWLGSDLVEQGKERLNRLGYFETVETETQRIPGSPDQVDIVYRVKERNTGSLNFGVGFGTESGVSFQVGVTQDNWLGTGNAVAINASKNDYSTYAELSVTDPYFTVNGVSLGGRIFYNDFRANDADLSGYTNKSYGLDGTLGFPINEYNSARLGLGYTHNGLSRMEPQVAMWRYLESMGENPGFDKRESFNADDYTVSLGWTFNNLNRGFFPTSGARSNLSGRITIPGSDNKYYKVTWDGMAYYPLDEKESWVTLFKGRLGYGDGLGGKELPFYENFYAGGSGTVRGFRSNNIGPKAIYLKKITKDDGSTIIDPSLSSDAVGGNAMAVASFELITPTPFIDDKYSSSVRTSMFVDAGTVWDTNWNSTNSNWTAGMPDFGKASNIRVSTGVALQWLSPLGPLVFSYAKPIKDYEGDKSEQFQFNIGRTW

Flanking regions ( +/- flanking 50bp)

TCGCTTATAATAAAATAAGCAGGGACCGGTTAGGAAAACACAAAACAACGATGGCGATGAAAAAGTTGCTTATAGCGTCGCTGCTGCTGGGCAGCGCCACTGCATACGGTTCAGACGGATTCGTAGTTCAGGACATTCAATTTGAAGGTCTTCAACGCGTCGCCGTTGGTGCAGCATTACTGAACATGCCTGTCCGAGTTGGAGATTCGGTCAGTGATGATGATATTAGTCGAACTATCCGTTCATTATTTGCGACAGGAAACTTCGATGATGTTCGGGTTCTGCGTGACGGAAATGTACTTATTGTTCAAGTTAAAGAGCGTCCAACAATTGCGAGTATTACTTTCTCAGGTAACAAAGCAATTAAAGAAGATATGCTTAAGCAAAATCTTGATGCTTCCAATATCCGTATTGGTGAAACACTTGACCGAACAATGTTGGCTAATATTGAGAAAGGTCTTGAAGATTTCTACTATAGTGTTGGTAAATATAACGCCACAGTAAAAGTTGTTGTGACTCCTCTTCCTCGTAACCGTGTTGATTTAAAACTGGTATTTGCCGAAGGTGTTTCAGCTACTATTCAACAAATCAATATTGTTGGTAATAAAGCATTTAGTACTGCTGAATTAGTTAACCGCTTCCAACTACGTGATGATGTGCCTTGGTGGAACTTAGCGGCTGATGAAAAATATCAGAAACAAAAACTCGCTGGTGACTTAGAGACATTACGAAGTTTTTATCTAGATCGTGGTTATGCACGTTTTGATATTGAATCCACAAACGTTAGCTTAACGCCTGATAAAAAAGGTATTTATATTACTATTAACCTGAAAGAAGGTGATAAATACACGGTTGAAAGTACCGAAATCAATGGTAATACCGCAGGCTATACCAAAGAGATTGAAGATCTGATCCAAATCGCACCAGGCTCACTATATAACGGTGCTCAAGTGACCAAAACAGAAAATGAGATTAAAAATCTATTAGGTCGCTATGGATACGCCTATCCACGGGTGATGACAAATCCTGAAATTAATGATGAAAATAAAACGGTAAAACTGCATGTTAACGTTGATGCAGGGAATCGTTTCTATGTGCGTCAAATCCGTTTTGCGGGTAATGATATAACCAAGGACTCTGTTTTACGTCGTGAAATGCGTCAAATGGAAGGGGCTTGGTTAGGTAGCGATTTAGTTGAACAAGGTAAAGAGCGTTTAAACCGTTTAGGTTATTTTGAAACAGTCGAAACGGAAACACAGCGTATTCCCGGATCTCCTGATCAAGTTGATATCGTTTATCGTGTCAAAGAGCGTAATACGGGTTCACTTAACTTTGGTGTCGGTTTCGGTACAGAAAGTGGTGTCAGCTTCCAAGTTGGGGTAACACAGGATAACTGGTTAGGAACGGGGAATGCCGTTGCGATTAATGCCAGTAAAAATGATTACTCAACGTATGCTGAATTGTCAGTCACTGATCCTTACTTTACTGTAAATGGTGTCAGCTTAGGAGGTCGTATTTTCTATAACGATTTCCGAGCTAATGATGCAGATTTATCCGGCTATACCAATAAATCTTATGGGTTAGACGGCACCTTAGGTTTCCCTATCAATGAATACAACTCGGCTCGTCTTGGCTTAGGCTATACCCATAACGGCCTGTCACGGATGGAACCTCAAGTGGCGATGTGGCGTTATCTTGAAAGTATGGGGGAAAACCCAGGCTTTGATAAACGCGAATCCTTTAATGCGGATGACTATACTGTCAGTCTTGGGTGGACATTTAATAACTTAAACCGTGGTTTCTTCCCAACCTCTGGGGCAAGAAGTAATTTAAGTGGACGTATTACTATACCGGGCTCTGATAACAAGTACTATAAAGTAACTTGGGACGGTATGGCTTATTACCCTCTTGATGAAAAAGAGTCTTGGGTCACCTTGTTCAAAGGTCGTTTAGGTTACGGTGACGGTTTAGGGGGTAAAGAATTACCCTTCTATGAAAACTTCTATGCCGGTGGTTCTGGTACAGTACGTGGTTTCCGTTCCAATAATATCGGTCCTAAAGCGATTTATTTGAAAAAAATTACAAAAGATGATGGGAGTACGATAATTGATCCTTCATTATCTAGCGATGCGGTCGGTGGTAATGCTATGGCGGTGGCTAGCTTTGAACTGATCACACCAACGCCATTTATTGATGATAAATACTCCTCATCCGTCAGAACTTCAATGTTTGTTGATGCGGGTACGGTATGGGATACCAACTGGAACAGTACTAATTCTAATTGGACTGCTGGTATGCCTGATTTTGGTAAGGCAAGTAATATACGTGTTTCAACCGGTGTGGCTTTACAGTGGTTATCACCTTTAGGTCCGTTAGTCTTCTCTTATGCGAAGCCAATTAAAGATTACGAAGGCGATAAATCTGAGCAATTCCAGTTTAATATTGGTAGAACGTGGTAGCGATGTAAGTAAAGTTGATGCCTTTTCTATATATTGAGAAAAGACATCTC