Orthogroup:group_1054


Homologs in group_1054

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05970 FBDBKF_05970 Morganella morganii S1 bamA outer membrane protein assembly factor BamA
EHELCC_09015 EHELCC_09015 Morganella morganii S2 bamA outer membrane protein assembly factor BamA
NLDBIP_09395 NLDBIP_09395 Morganella morganii S4 bamA outer membrane protein assembly factor BamA
LHKJJB_08360 LHKJJB_08360 Morganella morganii S3 bamA outer membrane protein assembly factor BamA
HKOGLL_07910 HKOGLL_07910 Morganella morganii S5 bamA outer membrane protein assembly factor BamA
F4V73_RS15925 F4V73_RS15925 Morganella psychrotolerans bamA outer membrane protein assembly factor BamA
PMI_RS11245 PMI_RS11245 Proteus mirabilis HI4320 bamA outer membrane protein assembly factor BamA

Distribution of group_1054 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1054 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1054

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1054.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 bamA 7

Product

# Product Occurence
1 outer membrane protein assembly factor BamA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4775 7 M Cell wall/membrane/envelope biogenesis (M) Outer membrane protein assembly factor BamA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07277 7 outer membrane protein insertion porin family Mitophagy - animal -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01103 7 Omp85 superfamily domain
PF07244 7 Surface antigen variable number repeat

Annotations of the 92 SwissProt hits

Annotation Number of occurrences
Outer membrane protein assembly factor BamA 75
Putative outer membrane protein assembly factor TP_0326 1
SAM50-like protein SPAC17C9.06 1
Sorting and assembly machinery component 50 homolog 5
Sorting and assembly machinery component 50 homolog A 2
Sorting and assembly machinery component 50 homolog B 2
Sorting assembly machinery 50 kDa subunit 1
Translocation and assembly module subunit TamA 5

Protein length

Min length 797
Max length 802
Mean length (sd) 798.4 (1.6)
Median length 798.0

Protein length distribution