Homologs in group_159

Help

8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10515 FBDBKF_10515 35.0 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
EHELCC_14850 EHELCC_14850 35.0 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
NLDBIP_14680 NLDBIP_14680 35.0 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
LHKJJB_14665 LHKJJB_14665 35.0 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
HKOGLL_13285 HKOGLL_13285 35.0 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD
F4V73_RS01855 F4V73_RS01855 37.9 Morganella psychrotolerans - molecular chaperone
F4V73_RS10895 F4V73_RS10895 39.4 Morganella psychrotolerans - molecular chaperone
F4V73_RS14225 F4V73_RS14225 34.1 Morganella psychrotolerans - molecular chaperone

Distribution of the homologs in the orthogroup group_159

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_159

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P62609 5.3e-51 167 42 5 215 1 focC Chaperone protein FocC Escherichia coli
P62610 5.3e-51 167 42 5 215 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5E4 1.33e-42 146 37 6 221 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P59590 3.64e-42 145 36 6 213 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P75856 9.28e-42 144 36 6 221 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P31697 4.53e-41 142 36 6 213 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P42914 8.75e-40 139 34 6 218 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P43661 6.87e-38 134 35 4 226 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P35757 2.34e-37 133 36 5 228 3 hifB Chaperone protein HifB Haemophilus influenzae
P45991 2.93e-37 133 35 5 228 3 hifB Chaperone protein HifB Haemophilus influenzae
Q8X5K6 8.63e-36 129 36 7 225 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P37923 9.32e-36 129 34 6 222 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P33409 1.87e-33 123 33 6 215 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P33128 2.01e-33 123 32 9 234 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P77249 3.45e-32 119 30 5 223 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P25402 5.75e-31 116 35 7 217 3 fanE Chaperone protein FanE Escherichia coli
P26926 6.3e-31 117 37 7 216 1 caf1M Chaperone protein caf1M Yersinia pestis
P21646 2.92e-30 114 32 6 230 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P15319 2.21e-29 112 31 4 222 1 papD Chaperone protein PapD Escherichia coli
P15483 2.53e-29 112 31 4 227 3 None Chaperone protein CS3-1 Escherichia coli
P53520 1.65e-28 110 32 9 226 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P69966 3.11e-28 110 30 8 249 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 3.11e-28 110 30 8 249 3 psaB Chaperone protein PsaB Yersinia pestis
P33407 2.36e-27 108 29 7 244 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P53519 4.28e-27 106 32 5 232 3 cssC Chaperone protein CssC Escherichia coli
P53518 7.2e-27 105 33 4 229 3 cssC Chaperone protein CssC Escherichia coli
P46004 9.95e-27 106 29 3 205 3 aggD Chaperone protein AggD Escherichia coli
P53516 2.36e-26 105 30 2 186 3 afaB Chaperone protein AfaB Escherichia coli
P40876 7.27e-26 103 30 3 217 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P77599 3.19e-25 102 32 7 200 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P33342 7.83e-25 100 28 7 222 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P25401 2e-23 97 30 4 177 1 faeE Chaperone protein FaeE Escherichia coli
Q05433 1.23e-22 95 30 4 179 3 clpE Chaperone protein ClpE Escherichia coli
P77616 6.89e-22 93 31 5 180 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P46738 9.36e-22 92 28 2 186 3 nfaE Chaperone protein NfaE Escherichia coli
P75749 3.91e-21 91 30 9 220 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P33387 1.82e-18 84 24 6 238 3 sefB Chaperone protein SefB Salmonella enteritidis
P28722 5.32e-08 55 25 4 160 3 yhcA Uncharacterized fimbrial chaperone YhcA Escherichia coli (strain K12)
P42183 9.72e-06 46 32 3 105 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10905
Feature type CDS
Gene -
Product molecular chaperone
Location 2402288 - 2402953 (strand: -1)
Length 666 (nucleotides) / 221 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_159
Orthogroup size 9
N. genomes 7

Actions

Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MKSIILFFISLFIINTSYAGVIISGTRVIYNEGNKNVSINVKNPDKMPYLIQSWIDDFEEKKQSKFTITPPLFRLNPDKENTLRIFLTEEGLPSDQESLFWLNIKTIPATEKTENSLQIAFKTQMKLIYRPKSLKDVNFEEEQKKLSWSKERGKVIVYNPTPYFMNFQTIKFNGKLVDDVSYAKPFSTKSFDINDNNEHGLISWELINDYGANVDLSEVRI

Flanking regions ( +/- flanking 50bp)

AGGTTTAAAGGGATTTAAACCTTATTATACAATCATTTTATGGTGATAATATGAAGTCTATTATTCTATTTTTTATTTCTTTATTTATTATTAATACATCTTATGCAGGTGTTATTATTAGTGGCACAAGGGTAATTTATAATGAAGGCAATAAGAATGTCAGCATTAACGTGAAAAACCCAGATAAAATGCCTTATTTGATCCAGTCATGGATAGATGATTTTGAGGAAAAAAAACAGTCAAAATTTACGATCACGCCACCTTTATTTAGATTGAATCCAGATAAAGAGAATACATTGAGGATCTTTTTAACAGAAGAAGGGCTACCAAGTGATCAAGAATCTCTTTTTTGGTTAAATATAAAAACGATCCCTGCTACAGAAAAAACAGAAAATTCATTACAAATTGCATTTAAAACGCAAATGAAATTGATCTATAGACCTAAAAGTCTAAAAGACGTTAATTTTGAAGAAGAACAAAAGAAATTATCTTGGTCAAAGGAAAGAGGGAAAGTCATAGTTTATAATCCCACACCTTATTTTATGAATTTTCAAACAATAAAATTTAATGGAAAATTGGTTGATGATGTTTCTTATGCTAAACCTTTTTCAACTAAATCATTTGATATAAATGATAATAATGAACATGGTCTTATAAGCTGGGAGCTTATTAATGATTATGGGGCTAATGTGGATTTATCCGAAGTTAGAATATAATAATTAGGTTTCTAATATGAAAATAAGTAAGGTATGTATTAGCCTCATTT