Homologs in group_159

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10515 FBDBKF_10515 33.8 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
EHELCC_14850 EHELCC_14850 33.8 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
NLDBIP_14680 NLDBIP_14680 33.8 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
LHKJJB_14665 LHKJJB_14665 33.8 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
HKOGLL_13285 HKOGLL_13285 33.8 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD
F4V73_RS10895 F4V73_RS10895 35.6 Morganella psychrotolerans - molecular chaperone
F4V73_RS14225 F4V73_RS14225 35.1 Morganella psychrotolerans - molecular chaperone
PMI_RS10905 PMI_RS10905 37.9 Proteus mirabilis HI4320 - molecular chaperone

Distribution of the homologs in the orthogroup group_159

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_159

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P62609 4.95e-39 137 32 5 220 1 focC Chaperone protein FocC Escherichia coli
P62610 4.95e-39 137 32 5 220 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5K6 3.06e-37 132 35 7 220 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P43661 6.6e-35 127 33 7 215 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P42914 6.65e-35 127 35 7 211 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P31697 4.13e-34 125 33 8 218 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P59590 8.46e-34 124 33 8 218 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5E4 9.65e-34 124 35 4 196 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P75856 4.85e-33 122 35 4 196 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P37923 3.03e-29 112 33 8 212 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P33409 8.54e-28 108 27 5 230 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P26926 5.25e-27 107 35 9 216 1 caf1M Chaperone protein caf1M Yersinia pestis
P25402 9.65e-27 105 35 5 176 3 fanE Chaperone protein FanE Escherichia coli
P53516 2.68e-25 102 31 4 194 3 afaB Chaperone protein AfaB Escherichia coli
P53520 6.06e-25 101 32 8 214 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P15483 2e-24 99 35 4 201 3 None Chaperone protein CS3-1 Escherichia coli
P46004 5.63e-24 99 29 6 231 3 aggD Chaperone protein AggD Escherichia coli
P21646 4.63e-22 93 28 8 223 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P77249 5.31e-22 93 28 8 216 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P33342 7.29e-22 93 27 8 226 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P46738 3.1e-21 91 31 5 196 3 nfaE Chaperone protein NfaE Escherichia coli
P45991 2.07e-20 89 27 6 222 3 hifB Chaperone protein HifB Haemophilus influenzae
P75749 2.22e-20 89 29 10 226 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P33128 4.74e-20 88 27 8 233 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P35757 5.33e-20 88 27 5 220 3 hifB Chaperone protein HifB Haemophilus influenzae
P33387 1.05e-19 87 31 7 208 3 sefB Chaperone protein SefB Salmonella enteritidis
P77599 1.25e-19 87 30 9 209 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P53519 2.43e-19 86 30 8 211 3 cssC Chaperone protein CssC Escherichia coli
P77616 2.74e-19 86 25 9 227 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P69966 6.97e-19 85 25 6 222 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 6.97e-19 85 25 6 222 3 psaB Chaperone protein PsaB Yersinia pestis
P53518 1.98e-18 84 29 8 211 3 cssC Chaperone protein CssC Escherichia coli
Q05433 1.5e-17 82 28 9 223 3 clpE Chaperone protein ClpE Escherichia coli
P25401 1.57e-17 82 28 9 223 1 faeE Chaperone protein FaeE Escherichia coli
P15319 2.8e-17 80 29 6 158 1 papD Chaperone protein PapD Escherichia coli
P33407 5.6e-15 75 24 10 245 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P40876 1.05e-14 73 26 4 206 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P28722 1.97e-12 67 24 6 204 3 yhcA Uncharacterized fimbrial chaperone YhcA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01855
Feature type CDS
Gene -
Product molecular chaperone
Location 404984 - 405655 (strand: 1)
Length 672 (nucleotides) / 223 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_159
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MKLASAFTFLFISIFVNISYAGISLGSTRVVISDGKNEGSINVHNKNDSNYLIQSWVLDESEKSTEDFVLTPPLFKLNSNTSNSLRVLLVKDLPQDKESLYWLNVKFIPSTNKNDDANKLTFAINNQVKIIYRPKSLSGNEMVEEFKKITIKKSGDNLKFTNPTKYYISISEILVDKKSLMAPSYISPESDVLVSLKGNNSVSKVEYTFVDDLGKLNLFEMNF

Flanking regions ( +/- flanking 50bp)

ATTTTCATAGGGTAGCGAATGCTACCCTATAAATAATAAATGGAGTCATAATGAAATTAGCCAGTGCTTTTACATTTTTATTTATAAGCATTTTTGTCAATATAAGCTATGCGGGTATATCACTAGGATCAACCCGTGTAGTGATTAGCGACGGGAAAAATGAGGGCAGTATTAATGTTCATAATAAAAATGATTCTAACTATTTGATTCAAAGTTGGGTGTTAGATGAAAGTGAGAAATCAACAGAAGACTTTGTATTGACTCCTCCATTATTTAAACTGAATTCTAATACATCTAATAGCCTGCGGGTTTTATTAGTAAAAGACTTACCGCAAGATAAAGAATCTTTATATTGGCTGAATGTAAAATTTATACCGTCAACAAATAAAAATGATGATGCTAATAAGTTAACATTTGCTATTAATAATCAGGTTAAGATTATTTACAGGCCGAAGTCACTGTCAGGAAATGAAATGGTGGAAGAGTTTAAGAAAATCACTATAAAAAAATCAGGTGATAATCTTAAATTTACCAATCCAACTAAATACTATATTAGTATCAGTGAGATTTTGGTGGATAAAAAATCATTAATGGCACCAAGTTATATTTCACCAGAGTCAGATGTATTGGTTTCACTGAAAGGAAATAATAGTGTATCAAAGGTAGAGTATACTTTTGTCGATGATTTAGGTAAGTTGAATTTATTTGAAATGAATTTTTAGCATTTTATATAATTTATTTAATATATTTTTCACGACAAGGATAAGTCAGG