Homologs in group_3737

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS05020 PMI_RS05020 28.4 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17145 PMI_RS17145 27.6 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3737

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3737

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37920 3.01e-08 56 32 4 137 3 fimA Type-1 fimbrial protein, A chain Salmonella typhi
P37921 8.41e-08 55 31 4 141 1 fimA Type-1 fimbrial protein, A chain Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P55223 2.14e-07 53 31 5 142 3 None Fimbrial subunit type 1 Salmonella typhimurium
P21648 1.1e-06 53 27 10 252 1 mrkD Fimbria adhesin protein Klebsiella pneumoniae
P77789 3.23e-05 47 28 4 142 3 ydeS Uncharacterized fimbrial-like protein YdeS Escherichia coli (strain K12)
P37926 3.77e-05 47 28 3 128 3 fimF Fimbrial-like protein FimF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P12730 9.45e-05 45 30 4 135 1 sfaA S-fimbrial protein subunit SfaA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P43660 0.000107 45 30 4 140 3 lpfA Long polar fimbria protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P13429 0.000215 45 27 4 127 1 sfaG S-fimbrial protein subunit SfaG Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P22595 0.000263 44 27 5 149 3 fimA Type-1 fimbrial protein subunit Serratia marcescens
P08189 0.000638 43 28 5 145 1 fimF Protein FimF Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10880
Feature type CDS
Gene -
Product fimbrial protein
Location 2397386 - 2398369 (strand: -1)
Length 984 (nucleotides) / 327 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3737
Orthogroup size 3
N. genomes 1

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Genomic region

Domains

PF00419 Fimbrial protein
PF22003 MrkD-like receptor binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07345 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Protein Sequence

MNHLINKKIFLLATLLFFSANSFAACIQNPNLKNIWVNIPNKVYTLQYDDMRTGILDKIIINYRAGPIKTFSGNDGKCGNSIISANYTNGWVPNAEKIVQTNIPGIGIQVYFNKFGALNTTWSKKGDGTHNSYLFEYPNWTVYIMKTGRVTQSGSLQWGKIAQAVQNNTQPKNTTWNLTSLYLPLNAIKINSLKCTTKSSNYNINMGIWYDTQFKNIGDVSKSVDIPITLNCAAGTNIKATVTSSAGYIDVNTGKLNLSGTNRATGVAIQLLDKNNNPIKLNTKNSLQNGVSSGDYIFGWKARYIKTGNKITPGSANSTATVNILYE

Flanking regions ( +/- flanking 50bp)

AGATAAAGTAGAAATAGAAAATAAAATATCAAATATAATAGGGAATAAAAATGAATCATTTAATAAATAAAAAAATTTTTTTATTAGCTACATTATTGTTTTTCTCAGCTAACTCCTTTGCGGCTTGTATTCAAAATCCTAATTTAAAAAATATTTGGGTTAATATACCCAATAAAGTTTATACACTTCAATATGATGATATGCGCACAGGTATATTAGATAAGATTATAATTAATTATAGAGCAGGACCTATAAAAACTTTTTCAGGTAATGATGGGAAATGTGGTAACTCTATAATTTCGGCAAATTATACTAATGGATGGGTACCAAATGCTGAGAAAATAGTACAGACAAATATCCCTGGTATAGGAATTCAAGTTTATTTCAATAAATTTGGCGCGTTAAACACCACTTGGTCTAAGAAAGGCGATGGAACACACAACTCATATTTATTTGAATACCCGAATTGGACAGTTTATATAATGAAAACAGGCAGAGTAACGCAATCAGGAAGCCTTCAATGGGGCAAGATTGCTCAAGCAGTACAAAATAATACACAACCTAAAAACACAACTTGGAACTTAACTTCACTTTATTTGCCTCTTAATGCAATAAAGATAAATTCATTAAAATGTACTACAAAATCATCAAATTATAATATTAATATGGGGATTTGGTATGATACTCAATTTAAAAATATTGGTGATGTCAGTAAAAGTGTAGATATTCCTATTACATTAAACTGTGCGGCTGGCACTAACATTAAAGCGACAGTGACAAGTAGTGCTGGATATATAGATGTAAATACAGGGAAATTAAACTTATCGGGCACTAATCGAGCCACTGGTGTTGCCATTCAGTTATTAGATAAAAACAATAACCCGATAAAACTAAATACAAAAAATAGTCTACAAAATGGGGTCTCCTCCGGTGATTATATATTTGGTTGGAAAGCAAGATATATAAAAACAGGTAATAAAATAACGCCAGGTAGTGCTAACTCAACAGCAACAGTAAATATCTTATATGAGTGATAATAATATATTTTTCGATATGGTTTTGTCATTCGAGGCGATTATGAATA