Homologs in group_1917

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14270 FBDBKF_14270 65.8 Morganella morganii S1 asd aspartate-semialdehyde dehydrogenase
EHELCC_08010 EHELCC_08010 65.8 Morganella morganii S2 asd aspartate-semialdehyde dehydrogenase
NLDBIP_08335 NLDBIP_08335 65.8 Morganella morganii S4 asd aspartate-semialdehyde dehydrogenase
LHKJJB_05930 LHKJJB_05930 65.8 Morganella morganii S3 asd aspartate-semialdehyde dehydrogenase
HKOGLL_04985 HKOGLL_04985 65.8 Morganella morganii S5 asd aspartate-semialdehyde dehydrogenase
F4V73_RS02640 F4V73_RS02640 64.9 Morganella psychrotolerans - aspartate-semialdehyde dehydrogenase

Distribution of the homologs in the orthogroup group_1917

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1917

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P08390 2.84e-146 418 59 1 337 1 usg USG-1 protein Escherichia coli (strain K12)
P23247 9.14e-102 305 45 2 338 1 asd2 Aspartate-semialdehyde dehydrogenase 2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q60080 5.04e-93 282 44 2 317 3 asd Aspartate-semialdehyde dehydrogenase (Fragment) Vibrio mimicus
Q56732 1.33e-88 272 39 3 339 3 asd Aspartate-semialdehyde dehydrogenase Shewanella sp. (strain DB6705)
Q56734 3.73e-88 271 38 3 339 3 asd Aspartate-semialdehyde dehydrogenase Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
O31219 3.38e-79 248 37 3 340 3 asd Aspartate-semialdehyde dehydrogenase Legionella pneumophila
O67716 1.51e-67 218 36 5 337 3 asd Aspartate-semialdehyde dehydrogenase Aquifex aeolicus (strain VF5)
Q4UM57 3.42e-66 214 36 5 339 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92IJ0 5.54e-63 206 34 3 336 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZDL2 6.63e-62 203 35 5 339 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia prowazekii (strain Madrid E)
Q68X56 1.72e-61 202 35 7 341 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P96199 1.96e-61 202 37 4 337 3 usg USG-1 protein homolog Azotobacter vinelandii
Q1RIB3 5.23e-60 198 34 7 341 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia bellii (strain RML369-C)
O87014 5.66e-58 193 36 3 336 1 usg USG-1 protein homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q59291 6.52e-53 180 33 9 344 3 asd Aspartate-semialdehyde dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P49420 1.67e-52 179 33 5 332 3 asd Aspartate-semialdehyde dehydrogenase Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)
Q55512 6.11e-49 170 32 4 331 3 asd Aspartate-semialdehyde dehydrogenase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q04797 1.18e-48 169 32 7 345 1 asd Aspartate-semialdehyde dehydrogenase Bacillus subtilis (strain 168)
P10539 5.79e-43 155 28 6 343 3 asd Aspartate-semialdehyde dehydrogenase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P41404 5.8e-43 154 32 6 347 3 asd Aspartate-semialdehyde dehydrogenase Mycolicibacterium smegmatis
P9WNX5 2.12e-41 150 32 6 347 1 asd Aspartate-semialdehyde dehydrogenase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNX4 2.12e-41 150 32 6 347 3 asd Aspartate-semialdehyde dehydrogenase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A543 2.12e-41 150 32 6 347 3 asd Aspartate-semialdehyde dehydrogenase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q53612 4.71e-41 149 31 7 342 3 asd Aspartate-semialdehyde dehydrogenase Streptomyces akiyoshiensis
P45201 1.06e-40 147 33 11 342 3 usg USG-1 protein homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0C1D9 4.94e-37 139 32 9 348 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium melassecola
P0C1D8 1.61e-36 137 32 9 348 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P41400 7.74e-36 135 32 9 348 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium flavescens
Q9ZK28 2.53e-35 134 30 10 346 3 asd Aspartate-semialdehyde dehydrogenase Helicobacter pylori (strain J99 / ATCC 700824)
O25801 6e-34 130 28 10 349 3 asd Aspartate-semialdehyde dehydrogenase Helicobacter pylori (strain ATCC 700392 / 26695)
O28766 1.72e-14 76 23 13 366 3 asd Aspartate-semialdehyde dehydrogenase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q57658 7.81e-14 75 24 13 370 1 asd Aspartate-semialdehyde dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O26890 1.27e-10 65 23 12 360 3 asd Aspartate-semialdehyde dehydrogenase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q75FC8 3.05e-07 55 23 7 273 3 asd Aspartate-semialdehyde dehydrogenase Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
P41394 3.69e-07 54 23 8 273 3 asd Aspartate-semialdehyde dehydrogenase Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
P78780 0.000101 47 23 12 293 1 SPCC1827.06c Probable aspartate-semialdehyde dehydrogenase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A9VG72 0.000541 45 21 11 350 3 argC N-acetyl-gamma-glutamyl-phosphate reductase Bacillus mycoides (strain KBAB4)
P44801 0.001 44 21 10 372 1 asd Aspartate-semialdehyde dehydrogenase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08780
Feature type CDS
Gene -
Product aspartate-semialdehyde dehydrogenase
Location 1919840 - 1920850 (strand: -1)
Length 1011 (nucleotides) / 336 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1917
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01118 Semialdehyde dehydrogenase, NAD binding domain
PF02774 Semialdehyde dehydrogenase, dimerisation domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0136 Amino acid transport and metabolism (E) E Aspartate-semialdehyde dehydrogenase

Kegg Ortholog Annotation(s)

Protein Sequence

MGEGWNIALVGATGAVGEAILELLQERDFPIGELTAIASEDSIGKTIRVKGKSVAVQGIHNIEWADIQLAFFAAPVEISAQYAQLAADSGCIVIDCSGLFAMEWDVPLVVPGVNTSMLAEYRNRNIIAIADSMVSQLLRAIYPLTEAAGLTRLNVTNLMSVSRFGKQAVDELAGQSARLLNGVPPELGRFNKQLAFNILPLLVDNEGSIQEERQMVDQIRKILQDDGLPISVTTLQAPVFYGHAQSVQLETSRPMGSEEARETLQEHDSLNISDENDFPTQVTDASGNVSLNLGCLRNDYGVPEALQFWSVADNVRFGGALMAVEVAEKLVQEQFY

Flanking regions ( +/- flanking 50bp)

AAATAAGACGTGACATTATTTAAACATTTTACTGTATTGGAGGATATTTTATGGGAGAGGGTTGGAATATTGCGCTTGTGGGCGCAACAGGTGCTGTGGGTGAAGCTATTTTAGAGCTTCTGCAAGAGCGTGATTTTCCTATTGGCGAATTAACGGCGATCGCCAGTGAAGACAGTATTGGCAAAACTATCCGTGTAAAGGGTAAAAGTGTTGCAGTACAAGGTATTCATAATATCGAATGGGCGGATATTCAACTCGCTTTTTTTGCCGCGCCGGTTGAGATTAGTGCGCAATACGCACAACTTGCAGCAGATTCAGGTTGTATTGTTATTGATTGCAGTGGTTTATTTGCGATGGAGTGGGATGTACCTTTAGTTGTACCAGGGGTGAATACATCTATGCTGGCAGAGTATCGTAACCGCAATATTATCGCTATTGCTGATAGCATGGTAAGCCAACTGTTACGCGCTATCTATCCATTAACCGAAGCCGCAGGCTTAACTCGCTTGAATGTGACAAATTTGATGTCAGTATCTCGTTTTGGTAAACAAGCTGTTGATGAATTAGCGGGGCAAAGTGCGCGCTTACTGAACGGTGTTCCTCCAGAACTTGGTCGCTTTAATAAACAACTGGCATTTAATATTTTACCATTGTTAGTTGATAATGAAGGCTCTATTCAAGAAGAGCGCCAAATGGTTGATCAGATCCGTAAAATCTTGCAAGACGATGGACTACCTATCTCAGTAACCACATTACAAGCGCCTGTTTTCTATGGTCATGCACAATCTGTGCAGTTGGAAACATCACGTCCAATGGGAAGTGAAGAAGCACGGGAAACATTACAAGAACATGACTCCCTCAATATTAGTGATGAAAATGATTTTCCAACTCAAGTCACCGATGCCTCCGGTAATGTTAGCTTGAACTTAGGTTGCTTACGTAATGATTATGGTGTGCCTGAAGCGTTACAATTTTGGTCTGTTGCAGATAACGTGCGTTTTGGCGGAGCATTAATGGCTGTAGAAGTGGCTGAAAAATTAGTGCAGGAGCAGTTTTACTGATGAACGACCAAGAGAGTGCTGATGTGATAGCGCAGTCAATCAGTGAGCCT