Homologs in group_1578

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10250 FBDBKF_10250 43.7 Morganella morganii S1 - ABC-type uncharacterized transport system, periplasmic component
EHELCC_14585 EHELCC_14585 43.7 Morganella morganii S2 - ABC-type uncharacterized transport system, periplasmic component
NLDBIP_14415 NLDBIP_14415 43.7 Morganella morganii S4 - ABC-type uncharacterized transport system, periplasmic component
LHKJJB_14930 LHKJJB_14930 43.7 Morganella morganii S3 - ABC-type uncharacterized transport system, periplasmic component
HKOGLL_13550 HKOGLL_13550 43.7 Morganella morganii S5 - ABC-type uncharacterized transport system, periplasmic component
F4V73_RS13965 F4V73_RS13965 45.3 Morganella psychrotolerans - DUF1007 family protein

Distribution of the homologs in the orthogroup group_1578

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1578

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44137 4.41e-37 131 36 4 194 3 HI_1249 Uncharacterized protein HI_1249 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07365
Feature type CDS
Gene -
Product DUF1007 family protein
Location 1612320 - 1612985 (strand: -1)
Length 666 (nucleotides) / 221 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1578
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF06226 Protein of unknown function (DUF1007)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3683 General function prediction only (R) R ABC-type uncharacterized transport system, periplasmic component

Protein Sequence

MWIANFKNFSWRAVPILMSFFLLMTTPKVLAHPHSFIDMQTTFNTQDDKLIGLTFSWVMDPITSMDILYDIYNAQPESDIWKKQAARLMSNILSQNYFSEFYMDGKKQKFRRIPSHYTLIKEKLQVKFSFDVLFITPLPFAKHHFELLTYDPTFYVSMTYRDNTQIILPLEMIADCKHKLIEPFADESLKEYAQSLDINGSTDSDLNLGLSFTQRVQVLCQ

Flanking regions ( +/- flanking 50bp)

ACAAATCCGTGATGTTATATTATAACAAAATATCATGGGTGGTTTTGTTTATGTGGATAGCTAATTTTAAAAATTTCTCTTGGCGAGCAGTTCCGATATTGATGTCTTTCTTTTTATTGATGACTACACCAAAAGTTTTAGCACATCCTCATAGCTTTATTGATATGCAAACAACTTTTAATACACAAGATGATAAGTTAATTGGATTAACTTTTTCTTGGGTTATGGATCCGATAACCTCAATGGATATTCTGTACGATATATATAATGCGCAACCAGAAAGTGATATTTGGAAAAAACAGGCGGCGAGATTAATGAGCAATATATTATCTCAGAACTATTTTTCCGAGTTTTATATGGATGGGAAAAAACAAAAGTTTCGTCGTATACCAAGCCATTACACTCTTATAAAAGAGAAGTTACAGGTGAAGTTTAGCTTTGATGTGCTATTTATCACCCCATTGCCATTCGCTAAACATCATTTTGAACTTTTAACTTATGATCCCACTTTTTATGTCAGCATGACCTATCGTGACAATACACAGATCATATTGCCTTTAGAAATGATCGCTGATTGTAAACACAAACTGATTGAACCTTTTGCTGATGAAAGTTTAAAAGAATATGCACAATCATTAGATATCAATGGCTCTACTGATAGTGATTTAAATTTAGGGCTCTCTTTTACACAACGAGTACAAGTATTATGCCAATAAATATAACGAAGGAAAGGGGATTACTAATTAGCTTACTCACAGTGATAGCC